Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi234g00019 ATGGGGATCCAAACAATGGGGTCTCAAGGAGGTGGTGATGGTAATGGAAAACATTCACAACTCCAACCTCTTGTGCGGCAAAGTTCGGTATACAGTCTCACACTTGATGAAGTTGAAAATCAGTTAGGTGATTTGGGAAAACCGCTAAGTAGTATGAACCTAGACGAGCTTCTTAAAAATGTATGGACTGTTGAGGTGAACCAGTCAACGAGTTCGGACAATGAAGGAGCAGCACAAGCTAGTGAAGCTTCTCTACAACGTCAAGCTAGTCTGTCGTTAAAAGCTGCATTGAGCAAGAAGACTGTGGATGAGGTATGGAGAGATATCCAACAAAAGAAAGACAGCGACGAGAAGAAGACACAGGAGAGACAAACTACTTTAGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCGGGTATAGTTGCTGAAGCGCCTTCTAATAAAACGAATACCGATACTACCGCTGGAATGGATTCAAATGTAGCAGTATCACAGTTTCCGCAATCGCAAGGTCAGTGGATTCCGTATCCGCAATCGCAACCACAATTTCAGCAGCATCTACAACAAAGTGCAATGGGGGTTTATATGGCTAGCCAGGGTATGGCACAGCCGATACACATGGGGGTTGGTGCGTCGATGGAGATTCCGTTTGCAGATAGTCATATGGCACTGGCTGCACCTCTTATGGGAACTGTGTCGGATACGCAGATTTCCGGAATGAAAAGGAGCGCCCCTGAGGATATGGTGGAAAAAACTGTTGAGAGAAGGCAGAAAAGGATGATCAAGAATCGGGAATCCGCTGCCCGTTCAAGAGCAAGGAAACAGGCTTACACAAATGAATTGGAGAACAAAGTTTCGCGCTTGGAAGAGGAAAACGAAATGCTGAGGAAACGAAAGGAGCTAGAGACTATGTTGCCATGCGTACCGATTACTGAACCTAAATACCAGCTACGCCGAATAGCATCTTCTCCATTCTGA 981 0.4577 MGIQTMGSQGGGDGNGKHSQLQPLVRQSSVYSLTLDEVENQLGDLGKPLSSMNLDELLKNVWTVEVNQSTSSDNEGAAQASEASLQRQASLSLKAALSKKTVDEVWRDIQQKKDSDEKKTQERQTTLGEMTLEDFLVKAGIVAEAPSNKTNTDTTAGMDSNVAVSQFPQSQGQWIPYPQSQPQFQQHLQQSAMGVYMASQGMAQPIHMGVGASMEIPFADSHMALAAPLMGTVSDTQISGMKRSAPEDMVEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENEMLRKRKELETMLPCVPITEPKYQLRRIASSPF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi234g00019 326 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 254 299 IPR004827 GO:0003700|GO:0006355
Vivi234g00019 326 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 25 321 IPR043452 GO:0003700|GO:0045893
Vivi234g00019 326 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 259 274 IPR004827 GO:0003700|GO:0006355
Vivi234g00019 326 Gene3D - 254 307 - -
Vivi234g00019 326 SUPERFAMILY Leucine zipper domain 256 301 IPR046347 GO:0003700|GO:0006355
Vivi234g00019 326 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 254 306 - -
Vivi234g00019 326 MobiDBLite consensus disorder prediction 1 23 - -
Vivi234g00019 326 Coils Coil 272 306 - -
Vivi234g00019 326 CDD bZIP_plant_BZIP46 256 310 - -
Vivi234g00019 326 Pfam bZIP transcription factor 256 300 IPR004827 GO:0003700|GO:0006355
Vivi234g00019 326 SMART brlzneu 252 324 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi234g00019 22 326 bZIP Transcription Factor Family AT3G56850 53.698 6.69e-89 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi234g00019 bZIP_1 1.2e-13 CL0018