Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi233g00061 ATGGCGGCTCTGTTACCTTGCACCCCGACTATACTCTCTCCTCCGTTAACGAACCGGCGGAGGAGCCATCTTCCGCTTAAACCTCACTCCCACGCCTTCTCGGGGTCTACCAAACGGTTTCTTCGCGGTTCTCTCTCCGTTGCCCGGTTCGGATTGCAGCCCGGTTTTTTACCCGAACCGGATGACGCCGGATTTGTTGTCAGGGAATTGATTAACCGAGCGGAGGGTTTGCTTTATACAATTGCGGATGCGGCTGTTTCGAATTCTGATACGGTGGTAACCACCACCGCTGCGAAACAGAGTAACGATTGGCTTTCGGGAATTACCAATTTTATGGAGACGATTCTCAAGGTATTCAAGGATGGACTTTCTTCTTTGCATGTGCCGTATGCATATGGTTTTGCAATTATAATGCTCACTGTTCTTGTAAAAGCGGCCACATTTCCGTTGACAAGAAAGCAGGTAGAATCTGCCATGGCTATGCGATCTTTGCAACCTCAAGTAAAGGCTATCCAGAAACAGTATGCTGGGGATCAGGAGAGAATTCAACTTGAAACCGCTCGGTTATATAAATTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCTCTTCTCTTAACAACACCAGTGTGGATCGGGCTATATCGAGCCTTTTCTAATGTGGCAGATGAGGGACTCCTTAACGAAGGCTTCTTTTGGATACCTTCTCTTTCTGGTCCTACTACAATTGCAGCTCGGCAAAATGGAAGTGGCATCTCTTGGCTTTTTCCTTTTGTGGATGGACACCCTCCCCTTGGATGGCCAGATACCCTGGCTTACCTTGTCTTGCCTGTTTTGCTGGTTGTCTCTCAATACATTTCTCTTCAAATAATTCAGTCATCTCAGGCTACTGACCCCAACGCGAAGAGTTCTCAAATCTTAAACAAGTTCCTTCCATTAGTGATTGGTTATTTTTCTCTTTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTCACAAATAATATATTGAGCACTTTACAGCAAATATGGCTTCAAAAGTTAGGAGGTGCAAAAAATCCTTTGAGACAAGTTCTAGATGATAATCTGAAAAATGACCTAATACAGACTATGAAGCCAGTATCTAAATTAAATTCCACAAAAGTTGAAGAAACTAGAAAAGTTGAAAAGTTGACATCAGAGGGGCCACAACCTGGTGACAGATTTAAGCAATTAATGGAGCAAGAGGCAAGGAAGAAACAAAAGAGAGAAGAAGAAAAAAGGAAGGCTGAAGCAGCAGCAGCTAAAGCTAATCAGGAGCAAACAATTGAAGGGGAAAATCAAGCTGTAAACGACTTAGTTGAAAATTCCCAATCCGCGGCTGCTGATACTGATCCATCTATATCAGGAGTAGTAAATGGTAAACCATTAAGTAAGGACTTGGAGGGAGATCAGAATTCTACATCCACATCTGATACTGAAAATGATGAAGGTTCTTCTCATTTCAATTCAGTAAACGAGAAAACTCTAGAAAAGGAACCAAGAGAAGTACTAACAACCACAGCTACTACAAACACGCAACCCCAAGGAGAGGATTCAGATCACGTGGCAAAGGATTGA 1596 0.4348 MAALLPCTPTILSPPLTNRRRSHLPLKPHSHAFSGSTKRFLRGSLSVARFGLQPGFLPEPDDAGFVVRELINRAEGLLYTIADAAVSNSDTVVTTTAAKQSNDWLSGITNFMETILKVFKDGLSSLHVPYAYGFAIIMLTVLVKAATFPLTRKQVESAMAMRSLQPQVKAIQKQYAGDQERIQLETARLYKLANINPLAGCLPLLLTTPVWIGLYRAFSNVADEGLLNEGFFWIPSLSGPTTIAARQNGSGISWLFPFVDGHPPLGWPDTLAYLVLPVLLVVSQYISLQIIQSSQATDPNAKSSQILNKFLPLVIGYFSLSVPSGLSLYWFTNNILSTLQQIWLQKLGGAKNPLRQVLDDNLKNDLIQTMKPVSKLNSTKVEETRKVEKLTSEGPQPGDRFKQLMEQEARKKQKREEEKRKAEAAAAKANQEQTIEGENQAVNDLVENSQSAAADTDPSISGVVNGKPLSKDLEGDQNSTSTSDTENDEGSSHFNSVNEKTLEKEPREVLTTTATTNTQPQGEDSDHVAKD 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi233g00061 531 MobiDBLite consensus disorder prediction 378 395 - -
Vivi233g00061 531 CDD 5TM_YidC_Alb3 133 346 IPR047196 -
Vivi233g00061 531 Coils Coil 373 393 - -
Vivi233g00061 531 MobiDBLite consensus disorder prediction 508 523 - -
Vivi233g00061 531 MobiDBLite consensus disorder prediction 377 531 - -
Vivi233g00061 531 Coils Coil 401 448 - -
Vivi233g00061 531 Pfam 60Kd inner membrane protein 132 346 IPR028055 -
Vivi233g00061 531 MobiDBLite consensus disorder prediction 432 458 - -
Vivi233g00061 531 MobiDBLite consensus disorder prediction 403 426 - -
Vivi233g00061 531 PANTHER OXA1 83 420 IPR001708 GO:0016020|GO:0032977
Vivi233g00061 531 MobiDBLite consensus disorder prediction 472 497 - -
Vivi233g00061 531 NCBIfam membrane protein insertase YidC 132 346 IPR028055 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi233g00061 62 419 Chloroplast and Mitochondria Gene Families AT2G28800 52.500 1.16e-128 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi233g00061 K03217 - gmx:100802546 746.888