Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi231g00045 ATGATTCACAAAACCATGTCTTCTCCACTCTTCTTCCTCCTCTTCACAATATTCACTTTCTGGGTTTTCTTCACTTCATCCCAAGCTGAAGAAGACGACGTAAGATGTCTCCGAGGCATCAAAGAATCCCTAGGAAATTCCGAAAGTGGTATTTCATCGTGGAGTTTCAACAACAACACCGTAGGTTTCATCTGTGATTTCGTTGGTGTCACTTGCTGGAACGTAAGAGAGAATCGAGTTTTGGGTTTGGAGCTAAAGGGTATGAATCTTAAGGGTAAGATCCCAGAATCCTTGAAGTATTGTGGACAAAACTTGCAAAGATTGGATCTTGGTTCAAATTCATTGAATTCTGTGATTCCAACACAGATCTGTAGTTGGATGCCGTTTTTGGTAACAATGGATTTGTCTAGTAATGATCTTTCAGGTTCAATTCCGAATACTCTTGTGAATTGTTCATATTTGAATGAGTTGATGTTATCTGATAATCATCTTAGTGGTAGAATACCTTATGAAATTGGTAGTTTAACTAGGCTTCATAAGTTTTCTGTTGCTAATAATCAGCTTAGTGGGAGTATTCCATCGTTTTTCAATGGTTTTGATAAGGATGGTTTTGAGGGGAATAGTGGTTTGTGTGGTGGTCCACTTGGTTCAAAGTGTGGGAGTATGAGTAAGAAGAATCTTGCTATTATTATTGCTGCTGGTGTTTTCGGTGCGGCGGCTTCGTTGTTGTTGGCTTTTGGGTTATGGTGGTGGTATCATATTAGGTTGAGGAGGGAGAGGAGTAAGGAAGGGTATGTTGTTGGTGGTGTTGATGATTGGGCGTTGAGGTTGAGAGGTCATAAGCTTGCTCAGGTTAATCTTTTTCAGAAACCGATTGTGAAGGTTAAGCTTGGTGATTTGATGGCTGCGACGAATAATTTTAGTTCGGAGAATGTTTTGATTACGACGAGGACGGGTGCGACGTATAGGGCGGATTTGCCGGATGGTTCGACGCTTGCGGTGAAGAGGTTGAGTACTTGTAAGATCGGTGAGAAGCAGTTTAAGATTGAGATGGAACGGTTGGGAAAGGTTAGGCATCCGAATTTGGCGCCTTTGTTAGGGTATTGCGTTGTGGAAGAGGAGAAGCTTTTGGTTTACAAGCATATGTCGAACGGGACACTTTATTCGTTGTTGCATAAGAATAGCGGTGCGTTGGATTGGTTGATGAGGTTTAGGATAGGGTTGGGTGCGGCGAGGGGACTTGCGTGGTTGCATCATGGTTGTCATCCTCCGTTTATACAGCAGAATATTTGCTCTAATGTGATTCTTGTTGACGAAGAATTCGACGCTCGGATAATGGACTTCGGACTCGCGAGGCTTATGACAACTGACTCGAACGGTAGTTTTGTGAACGGCGATTTGGGGGAGCTCGGTTATATCGCTCCTGAGTATTCGAGTACGATGGTTGCTTCGGTGAAAGGAGACGTGTATGGATTTGGAGTTTTGCTTTTAGAGTTGGTCACAGGGTGCAAACCTCTCGAGGTGAAGCGTGGCGATGAAGAATTTAAGGGTAATCTGGTGGATTGGGTGAATGTGCAGTCTAGTTCAGGCAGACTCAAGGATTGCATCGACAAAGCGATATGTGGAAAAGGTAACGACGAGGAGATTCTGGAGTTTCTGAAAATCGCATCCAAATGTATCGTTACTCGCCCGAAAAATAGGTGTTCTATGTATGAAGTTTATCATTCATTGAAAACCATTTCCAAAGACAATAGCTTCTCCGAACAAGACGATGAATTTCCATTGATCTTCGATAAGCCAGAAAATGATCCGTCAAAGTTCGTGCACTAG 1830 0.429 MIHKTMSSPLFFLLFTIFTFWVFFTSSQAEEDDVRCLRGIKESLGNSESGISSWSFNNNTVGFICDFVGVTCWNVRENRVLGLELKGMNLKGKIPESLKYCGQNLQRLDLGSNSLNSVIPTQICSWMPFLVTMDLSSNDLSGSIPNTLVNCSYLNELMLSDNHLSGRIPYEIGSLTRLHKFSVANNQLSGSIPSFFNGFDKDGFEGNSGLCGGPLGSKCGSMSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHIRLRRERSKEGYVVGGVDDWALRLRGHKLAQVNLFQKPIVKVKLGDLMAATNNFSSENVLITTRTGATYRADLPDGSTLAVKRLSTCKIGEKQFKIEMERLGKVRHPNLAPLLGYCVVEEEKLLVYKHMSNGTLYSLLHKNSGALDWLMRFRIGLGAARGLAWLHHGCHPPFIQQNICSNVILVDEEFDARIMDFGLARLMTTDSNGSFVNGDLGELGYIAPEYSSTMVASVKGDVYGFGVLLLELVTGCKPLEVKRGDEEFKGNLVDWVNVQSSSGRLKDCIDKAICGKGNDEEILEFLKIASKCIVTRPKNRCSMYEVYHSLKTISKDNSFSEQDDEFPLIFDKPENDPSKFVH 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi231g00045 609 Gene3D Transferase(Phosphotransferase) domain 1 382 603 - -
Vivi231g00045 609 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 269 381 - -
Vivi231g00045 609 Gene3D Phosphorylase Kinase; domain 1 269 381 - -
Vivi231g00045 609 FunFam Nuclear pore complex protein NUP107 30 194 - -
Vivi231g00045 609 Pfam Protein tyrosine and serine/threonine kinase 329 576 IPR001245 GO:0004672|GO:0006468
Vivi231g00045 609 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 382 591 - -
Vivi231g00045 609 SUPERFAMILY L domain-like 32 200 - -
Vivi231g00045 609 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 82 579 - -
Vivi231g00045 609 ProSiteProfiles Protein kinase domain profile. 307 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi231g00045 609 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Vivi231g00045 609 Gene3D Ribonuclease Inhibitor 30 221 IPR032675 -
Vivi231g00045 609 SUPERFAMILY Protein kinase-like (PK-like) 287 577 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi231g00045 9 603 Receptor kinase-like Gene Family AT3G28450 62.063 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Vivi231g00045 PK_Tyr_Ser-Thr 3.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi231g00045 - - gmx:100810378 905.205