Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi231g00025 | ATGGGAGGTGACGATCTTAAAAATGTCTCCATTGTTAAAAAGAAGAAAACCAAGAATGTTTCTTTTAGGTCAATTTTCATGCACGCTGATATTCTAGATTGGTTCTTCATGGTATTTGGTTCTTTGGGGGCAATCAGTGACGGCATAATGGTACCTTTGGTGGTGTTTATCACAAGCAAAATCATGAACTCTATGGGTGGTTTTTCTGCCTCAGCAAGCAACAACTTTGTTCATAGCATCAATGAGAATGCAGTTGCTGTGTTATATGTGGCTTGTGCCTCTTTTGTTGCTTGCTTCTTAGAGGGTTATTGTTGGACAAGAACAGGTGAAAGACAAGCCGCAAGAATGAGAGTTAGGTACATAAAAGCAATTTTAAGACAAGAAGTAGCATATTTCGATTTGCATGTTACAAGTACATCAGAAGTCATCACTAGCGTGTCTACAGACACACTAGTAATTCAAGATGTTCTAAGTGACAAGGTTCCAGATTTTTTGAAGAATATGTCTCGATTCATTGGGAGCTATATAGTGGCATTTATATCATTATGGAGATTGGCCATTGTTGGATTCCCTTTTGTAGTTCTACTTGTGGTTCCTGGTTTCATGTATAAGAGGACTTTGATGGGGTTGGCTAGAAAAATCAGACAAGAGTATAACCAAGCTGGTACAATAGTAGAACAAACAATATCTTCTATCAGAACTGTTTATTCTTTTGTAGGAGAAACCAAAACCATAGCTGCTTTCTCAGATGCCTTAAAAGGATCTGTGAAGTTGGGATTGAAACAAGGTTTAGCTAAAGGCTTAGTCATTGGAATCAATGGTGTTAATTATGCTGTATGGTCTTTAATTGCATATTATGGTAGCATATTGGTCATGTATCATGGTGCTAAAGGGGGTAATGTATTTGCAGTTGGATCATTATTTACAGTTGGTGGAACGGCTTTAGGATCTAGTTTAACAAATGTGAGATACTTCGCAGATGCAAGTGCTGCAGGAGAAAGAATAATGGAAGTAATAAAAAGAGTTCCAAAGATTGATTCAGAAAACATGGAAGGTGAAGTTTTAGAGAAAGTGTCAGGAGAAGTTGAATTCTGCCATGTTGAATTTGTGTATCCGTCAAGGCCAGAAAGTGTGATCTTAAATGATTTTTGCTTAAAGGTTCCATCAGGTAAAACAGTTGCATTAGTAGGAGGAAGTGGTTCGGGAAAATCAACTGTAATATCGCTTTTGCAAAGGTTTTATGATCCAATTGGTGGAGACATTCTTTTTGATGGAGTTCCTATTCATAAGTTGCAACTCAAATGGCTTAGATCTCAAATGGGATTGGTGAGTCAAGAACCTGCTTTATTTGCAACAAGTATTAAGGAGAATATACTTTTTGGAAGAGAGGATGCTACATATGAAGATGTTGTTGATGCTGCTAAAGCTTCAAATGCTCATAATTTCATTTCAAAGTTGCCACAAGGATATGATACTCAGGTTGGGGAGAGCGGAATACAAATGTCAGGAGGACAAAAGCAAAGGATTGCCATTGCAAGAGCCATAATAAAAATGCCAAGAATTCTATTGCTAGACGAAGCAACAAGTGCACTCGATTCTGAATCCGAGCGAGTAGTCCAAGAAGCTCTAGACAAAGTCGTGGTTGGACGCACCACCATCATCATCGCTCACCGCTTATCCACCATTCAAAATGCAGACATCATTGCATTCGTTCAAAATGGTAGAATCGTGGAAACGGGATCTCACGAGAGCCTCATTCAAAATAACAATTCGCTTTACACTTCCCTCGTTCATATCCAGCAAACCAAAAATGACCAAAACGAAGATACTCCATCTATCATTAATATAGATCACATGCAAAACACAAATAGTTATAGACACGCAGCACATTCTAGCTCTTTTGACTCAATGAAACGTGGTGGTGGGGATATTGTTAACGGTAAAAATGTTGTTGGAGATATCGTTAATAATGTTGAGGTATTTAATAATAATAATAAGAATAATAATATCTATAATGAGGAGGAGAGGGAGAAGAAGAAGGTAAAGGTTCCTTCATTTCGAAGGTTGTTGGCAATGAATTTTCCAGAGTGGAAGCAAGTGTGTTTGGGTTGTTTGAGTGCGATTTTCTTCGGTGCGGTTAATCCTTTGTATGCATTTTCAACAGGGTCAGTTGCATCAGTTTATTTTCTAGAGAACCGTGATGAGATCAAGAAACAAATTAGGATCTATGCATTTTGTTTTCTAGGGTTGGCTTTGTCGACAATGGTTTTAAATGTGCTTCAACACTATAGCTTTGCTTACATGGGAGAGTACTTGACTAAGAGGGTTAGAGAAAGAATGCTTTCCAAGATACTCACTTTTGAAGTTGGTTGGTTTGATGAGGATCAAAATTCTACAGGTGCTGTTTGCTCCAGACTTGCCAAAGAAGCCAATGTGGTAAGATCGTTGGTGGGGGATAGATTGTCACTAACGATACAAACTATATCAGCAGTGGCAGTAACATTCACAATGGGCCTAATCATTACTTGGAGACTATCCATTGTTATGATAGCAGTTCAGCCAATTAGCATAATTTGTTTCTACATAAAGTGTGTCCTTCTAAATAACATGTCAAGCAAAGCCATTAAGGCCCAAGATGAAAGTAGCAAAATAGCTGTTGAAGCTGTTTCAAATCTAAGAACCATCACATCTTTTTCATCACAAAATAGAATCCTTAAAATGCTTGAAAAATCCCAACAAGGCCCGAGTCATGAAAATATTAGACAATCATGGTTTGCAGGTATTGGGCTTGCATGTTCACAAAGCCTCATCTTTTGCACTAGAGCCTTAAACTTTTGGTATGGAGGAAAACTTGTGTCGCAAGGATATATAACAAAAAATGCATTTTTTGAGACTACTATGATTTGGATAAGCACTGGAAAAGTTATTGGTGATGCTGCTAGTAGCATGACTAATGATTTTGCTAAAGCTTCTAGTGCTGTTGGATCGGTTTTCGCAGTCCTTGATAGGTATACAAAAATTGAGCCAGATGATTTACAAGGTTACAAGGTTGAAAAACTAATCGGAAAAATTGAACTTCATGACGTTCATTTTGCATATCCAGCTAGGCCTAATTTGATGATCTTTCAAGGGTTCTCTATTAAAATTGACGCCGGAAAATCAACAGCTTTGGTCGGGGAAAGTGGTTCTGGAAAATCAACAATCATAGGACTAATTGAGAGATTTTATGATCCTTTTAAAGGGATGGTGACAATAGATGGTAGAGACATAAAGTCTTATAATCTAAGATCATTAAGGAAACACATTGCACTTGTGAATCAAGAACCAACATTGTTTGGGGGTACCATAAGGGACAATATAGCATATGGAGCATATGATGATAAAGTTGATGAAAGTGAGATCATTGAGGCTGCAAAGGCTGCAAAGGCTCATGATTTCATATCAAGCTTAAAAGATGGTTATGAGACATGGTGTGGTGATAAAGGAGTTCAACTTAGTGGTGGTCAAAAACAAAGAATTGCAATAGCTAGAGCTATATTGAAGAATCCAGAGGTGTTACTTTTGGATGAAGCAACTAGTGCACTTGATAGTCAATCAGAGAAACTAGTGCAAGATGCTTTAGAAAGGGTTATGGTTGGAAGGACAAGTGTGGTTGTGGCTCATAGGTTGAGTACTATACAAAACTGTGATCTGATTGCTGTTTTGGATAAGGGAATTGTTGTTGAAAAAGGAACACATTCATCTTTGTTGGCTAAGGGACCAAGTGGAGCTTATTACTCTTTGGTGAGTTTACAAAGAAGACCAACCAACACAATTGTCCATGCTTCACATGAAATCAACTAA | 3843 | 0.3781 | MGGDDLKNVSIVKKKKTKNVSFRSIFMHADILDWFFMVFGSLGAISDGIMVPLVVFITSKIMNSMGGFSASASNNFVHSINENAVAVLYVACASFVACFLEGYCWTRTGERQAARMRVRYIKAILRQEVAYFDLHVTSTSEVITSVSTDTLVIQDVLSDKVPDFLKNMSRFIGSYIVAFISLWRLAIVGFPFVVLLVVPGFMYKRTLMGLARKIRQEYNQAGTIVEQTISSIRTVYSFVGETKTIAAFSDALKGSVKLGLKQGLAKGLVIGINGVNYAVWSLIAYYGSILVMYHGAKGGNVFAVGSLFTVGGTALGSSLTNVRYFADASAAGERIMEVIKRVPKIDSENMEGEVLEKVSGEVEFCHVEFVYPSRPESVILNDFCLKVPSGKTVALVGGSGSGKSTVISLLQRFYDPIGGDILFDGVPIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATYEDVVDAAKASNAHNFISKLPQGYDTQVGESGIQMSGGQKQRIAIARAIIKMPRILLLDEATSALDSESERVVQEALDKVVVGRTTIIIAHRLSTIQNADIIAFVQNGRIVETGSHESLIQNNNSLYTSLVHIQQTKNDQNEDTPSIINIDHMQNTNSYRHAAHSSSFDSMKRGGGDIVNGKNVVGDIVNNVEVFNNNNKNNNIYNEEEREKKKVKVPSFRRLLAMNFPEWKQVCLGCLSAIFFGAVNPLYAFSTGSVASVYFLENRDEIKKQIRIYAFCFLGLALSTMVLNVLQHYSFAYMGEYLTKRVRERMLSKILTFEVGWFDEDQNSTGAVCSRLAKEANVVRSLVGDRLSLTIQTISAVAVTFTMGLIITWRLSIVMIAVQPISIICFYIKCVLLNNMSSKAIKAQDESSKIAVEAVSNLRTITSFSSQNRILKMLEKSQQGPSHENIRQSWFAGIGLACSQSLIFCTRALNFWYGGKLVSQGYITKNAFFETTMIWISTGKVIGDAASSMTNDFAKASSAVGSVFAVLDRYTKIEPDDLQGYKVEKLIGKIELHDVHFAYPARPNLMIFQGFSIKIDAGKSTALVGESGSGKSTIIGLIERFYDPFKGMVTIDGRDIKSYNLRSLRKHIALVNQEPTLFGGTIRDNIAYGAYDDKVDESEIIEAAKAAKAHDFISSLKDGYETWCGDKGVQLSGGQKQRIAIARAILKNPEVLLLDEATSALDSQSEKLVQDALERVMVGRTSVVVAHRLSTIQNCDLIAVLDKGIVVEKGTHSSLLAKGPSGAYYSLVSLQRRPTNTIVHASHEIN | 1280 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi231g00025 | 1280 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 690 | 1007 | - | - | |
Vivi231g00025 | 1280 | SUPERFAMILY | ABC transporter transmembrane region | 33 | 346 | IPR036640 | GO:0005524|GO:0016020 | |
Vivi231g00025 | 1280 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 37 | 335 | - | - | |
Vivi231g00025 | 1280 | FunFam | Putative ABC transporter B family member 8 | 664 | 1012 | - | - | |
Vivi231g00025 | 1280 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1017 | 1265 | IPR027417 | - | |
Vivi231g00025 | 1280 | Gene3D | - | 1014 | 1274 | IPR027417 | - | |
Vivi231g00025 | 1280 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 362 | 598 | IPR003439 | GO:0005524 | |
Vivi231g00025 | 1280 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 38 | 327 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vivi231g00025 | 1280 | Pfam | ABC transporter transmembrane region | 41 | 310 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vivi231g00025 | 1280 | Pfam | ABC transporter transmembrane region | 700 | 962 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vivi231g00025 | 1280 | SUPERFAMILY | ABC transporter transmembrane region | 687 | 1008 | IPR036640 | GO:0005524|GO:0016020 | |
Vivi231g00025 | 1280 | ProSitePatterns | ABC transporters family signature. | 1165 | 1179 | IPR017871 | GO:0005524|GO:0016887 | |
Vivi231g00025 | 1280 | Pfam | ABC transporter | 380 | 529 | IPR003439 | GO:0005524 | |
Vivi231g00025 | 1280 | FunFam | ABC transporter B family member 4 | 1014 | 1271 | - | - | |
Vivi231g00025 | 1280 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 354 | 600 | IPR027417 | - | |
Vivi231g00025 | 1280 | Gene3D | - | 352 | 601 | IPR027417 | - | |
Vivi231g00025 | 1280 | Pfam | ABC transporter | 1043 | 1193 | IPR003439 | GO:0005524 | |
Vivi231g00025 | 1280 | FunFam | ABC transporter B family member 1 | 24 | 361 | - | - | |
Vivi231g00025 | 1280 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 702 | 958 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vivi231g00025 | 1280 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1024 | 1262 | IPR003439 | GO:0005524 | |
Vivi231g00025 | 1280 | CDD | ABC_MTABC3_MDL1_MDL2 | 362 | 600 | - | - | |
Vivi231g00025 | 1280 | Gene3D | ABC transporter type 1, transmembrane domain | 25 | 621 | IPR036640 | GO:0005524|GO:0016020 | |
Vivi231g00025 | 1280 | SMART | AAA_5 | 1051 | 1245 | IPR003593 | GO:0016887 | |
Vivi231g00025 | 1280 | SMART | AAA_5 | 389 | 581 | IPR003593 | GO:0016887 | |
Vivi231g00025 | 1280 | ProSitePatterns | ABC transporters family signature. | 501 | 515 | IPR017871 | GO:0005524|GO:0016887 | |
Vivi231g00025 | 1280 | CDD | ABC_MTABC3_MDL1_MDL2 | 1024 | 1265 | - | - | |
Vivi231g00025 | 1280 | PANTHER | ABC TRANSPORTER B FAMILY | 12 | 599 | IPR039421 | - | |
Vivi231g00025 | 1280 | FunFam | ABC transporter B family member 4 | 352 | 608 | - | - | |
Vivi231g00025 | 1280 | Gene3D | ABC transporter type 1, transmembrane domain | 668 | 1012 | IPR036640 | GO:0005524|GO:0016020 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi231g00025 | 674 | 1271 | Calmodulin-binding Proteins | AT2G36910 | 36.424 | 4.67e-111 | 377 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi231g00025 | K05658 | - | gmx:100807709 | 1850.87 |