Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi231g00011 ATGGCATCAGGTGGAACAGAAGCTTTCCCAGATTTGGGTAAACACTGCCAACTTCTTGATTGTCACCAGCTCGATTTCCTTCCTTTCACCTGTGATGGCTGCAAACAGGTTTTCTGTGTAGAACACAGATCATACAAGTCTCATGATTGTCCCAAACCCGACCACAACAGCCGAAAAGTGGTTGTTTGCGAAGAATGTTCTATGTCAATGGAGATCACCGGAGAAAACGAAGAGACGATCTTAAAGAAACACCACAGTTCAGGGAAGTGTGACCCTAGCAAGAAGAAGAAACCAACTTGTCCTGTAAAGCGTTGCAAGGAGATTTTGACGTTTTCTAACACGAGTACATGTAAAACTTGCAACATTAAGGTGTGTCTCAAGCATCGTTTTTCTGCTGATCATGCTTGTAGAAGAGGAGGTTCAGCCTCTTTAACAAGTGGTGATGGTAACGGAAGTTGGAATAATAGGTTTATGGCCGCTTTAGCTTCAAGGAATAATGGTCAAGATTGTGGCAAAAAAGCTGGATCTCGTTCTAGTACTAATTCTCCTCCTAGTACTCCTTCTGTTAAAGCTTATTGA 579 0.4249 MASGGTEAFPDLGKHCQLLDCHQLDFLPFTCDGCKQVFCVEHRSYKSHDCPKPDHNSRKVVVCEECSMSMEITGENEETILKKHHSSGKCDPSKKKKPTCPVKRCKEILTFSNTSTCKTCNIKVCLKHRFSADHACRRGGSASLTSGDGNGSWNNRFMAALASRNNGQDCGKKAGSRSSTNSPPSTPSVKAY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi231g00011 192 Gene3D - 75 148 IPR035896 -
Vivi231g00011 192 ProSiteProfiles Zinc finger AN1-type profile. 94 144 IPR000058 GO:0008270
Vivi231g00011 192 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Vivi231g00011 192 SMART AN1_Zf_4 100 141 IPR000058 GO:0008270
Vivi231g00011 192 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
Vivi231g00011 192 MobiDBLite consensus disorder prediction 169 192 - -
Vivi231g00011 192 MobiDBLite consensus disorder prediction 166 192 - -
Vivi231g00011 192 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 8 180 - -
Vivi231g00011 192 SUPERFAMILY AN1-like Zinc finger 6 58 IPR035896 -
Vivi231g00011 192 Gene3D - 2 67 IPR035896 -
Vivi231g00011 192 SUPERFAMILY AN1-like Zinc finger 92 137 IPR035896 -
Vivi231g00011 192 Pfam AN1-like Zinc finger 100 137 IPR000058 GO:0008270
Vivi231g00011 192 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi231g00011 1 166 C2H2 Transcription Factor Family AT3G28210 63.314 2.81e-74 220