Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi229g00010 ATGAGCTTGGAAAAGCCACCATCAGCTGCTATGAGCCTGCCCAGCAGCCGTACCAGAATGGCACATGTGGGATTGCGGAAGGAAAATAAATGTATCGATGTAGATTGGACATTGGGAACCATACTGGCTGTGTTTAGAACTTTAATCGATGGATTGTTTTTGTGGAACATATTAAGGGAGCGTAGGGCAGTTCAAGTTGGAGATTTAATTGATCCTCCTAGAAAAATATCTCTTAGTTACTTGAAGACTTTAGTGTCCGTAGACTATTTTGCTGTATTGCCTCTACCTCAGATATTGGTATGGGCTATCCTTCCAAGTTACTCATATTCATCTGGAAAAATCTTTCTTAAGAGTACTCTGCAACAAGCAATCAATATTCAATTTATTCTTCGATTATTCAGATTTTTGCATCTCCTCAATGGCCAGTCAACAGCTAAAATAGTATTCAAATCTGTATGGGCAAATTCAATTATTAATTTACTCTGGTTTGTGATATTTGGCCATGTCGCGGGTTCAAGTTGGTTCTTCTTTGGACTAAAGAGGGTGAATGGATGTTTGATAGATGCATGCAATGATACCAATTCACCTATATGTGTGAAATTGCTTGATTGTAGTTATGAAAGGAAGAATGTATCATCTGCATGGATCAATGATAAGAATGCAATCGACTGTTTAACGTCAACATCATCCTTTTCTTATGGAATCTTTGAAAAGGTTCTGCCTCTTTCCATGGAAACTAATATATTCCACAAGTATGTGTATGCGCTATCTTGGGGATTTCAGCAAGTGAGTACTCTTGCGGGTAATCAAACCCCAACTTATTTGTTAGGGGAAGTCCTTTTTTCAATGACCATCAATGGAGTCGGAATTTTACTTTTAGCCTATTTTATAGGTAACGTACAAGCCTCTTTTCAGGGACTTAGCCGAAGAAAGCTTGAGATGCAACTTAGGCGCGATGAGCTTGAGTTTTATATGAAGCGTCGTGGCTTGCCAATAGATATAAAAAGGAGAGTAAAAGAATTCGAAGAATATCTCTGGGAAACCACTAGAGGAGTGTATGATGATATTGTTCTACAGAGTTTGCCCGATGATATTGCGAGGGACATACGACACCATCTTTTCAAATTTAAAGAGGAAGTACCGCCATTTTCCACAATAGATCAGAATGATCCTATCTTAGATGTCATTCGAAAGTGGCTAAAACATAAGATATACCTCAAAGGAACTATAATTTTGGCCGAGGAAGCTCAAATAGAGAAAATGGTGTTTATTATGAATGGAGAATTGGAGTGCACTAGAACAGATAAAATTTTGACTCCATTATGCAAAGGAGATGTGTGTGGGGACGAACTATTAGGATGGTATCTGAAAAATTCTTTTAATGAAAAAGGTGAAAAAGTAAAGTGTCCAGAGCAAGTACAAAAGGTTGTTAGTACGAGAACAGTAAAATGCAAAACTCACGTTGAGGCATTTTACATCGAAGCTAACAGCATTGAAGAAGTTATAAATTTATTCCCAAGATGTTCCGGAAACCCTCGTGTTTAA 1545 0.378 MSLEKPPSAAMSLPSSRTRMAHVGLRKENKCIDVDWTLGTILAVFRTLIDGLFLWNILRERRAVQVGDLIDPPRKISLSYLKTLVSVDYFAVLPLPQILVWAILPSYSYSSGKIFLKSTLQQAINIQFILRLFRFLHLLNGQSTAKIVFKSVWANSIINLLWFVIFGHVAGSSWFFFGLKRVNGCLIDACNDTNSPICVKLLDCSYERKNVSSAWINDKNAIDCLTSTSSFSYGIFEKVLPLSMETNIFHKYVYALSWGFQQVSTLAGNQTPTYLLGEVLFSMTINGVGILLLAYFIGNVQASFQGLSRRKLEMQLRRDELEFYMKRRGLPIDIKRRVKEFEEYLWETTRGVYDDIVLQSLPDDIARDIRHHLFKFKEEVPPFSTIDQNDPILDVIRKWLKHKIYLKGTIILAEEAQIEKMVFIMNGELECTRTDKILTPLCKGDVCGDELLGWYLKNSFNEKGEKVKCPEQVQKVVSTRTVKCKTHVEAFYIEANSIEEVINLFPRCSGNPRV 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi229g00010 514 Gene3D Jelly Rolls 380 507 IPR014710 -
Vivi229g00010 514 SUPERFAMILY cAMP-binding domain-like 310 507 IPR018490 -
Vivi229g00010 514 SUPERFAMILY Voltage-gated potassium channels 34 311 - -
Vivi229g00010 514 Gene3D Helix hairpin bin 309 374 - -
Vivi229g00010 514 Pfam Ion transport protein 37 310 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vivi229g00010 514 CDD CAP_ED 400 506 IPR000595 -
Vivi229g00010 514 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 29 508 - -
Vivi229g00010 514 Gene3D - 29 307 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi229g00010 23 459 Ion Channels AT3G17700 43.973 3.56e-122 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi229g00010 K05391 - gmx:100785556 452.21