Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi229g00007 ATGGCCTCTCAGCAGATAACAGAAGAAGCTGTTTACCTTTGCACTGGAAATCCATTGCCCAAAGACATTGAGCAAATATCTTACTGGCTTCTAAATGAACAATATTCAGAGAGCTTTAAAAGAATTAATGATTTGAAAACAAGGAAAGGGCTGACCCTTGTTGATATTGTAAGAGAAGTGACAATGTTTGTATTTAAGATTAAGATACCTCCAGCTGTTCGAGTGCAATTGGTGAATGATTTGGCTGACATAGAATGTTTTAGTGTTTGTGCAGGTGCATTGCATATAGATGTTGTAGTGATTGAATCAGATGATGTAGTAACTGCGGTAGCAGAGGAAGTAACTAAGGACACTTTAACCAAACTTGTCGTTGGAGCTTTGTCTTCTGGTATTTTCAGAAGGTATAAACATAAGGGTATGTCTGCAAGAATCTCAGTATGCACTCCAACATTTTGTACGGTTTACGCTGTTTCAAAGGGAAAATTGTCCATACGGCAATCAGACACACAAATTGATGGAAGTACTACGGATAACATGAGTGAAATCAGTTTTTCCTCAAGCGACTCATCAAACTTCACTCTAGGTTCTTGA 591 0.3807 MASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRINDLKTRKGLTLVDIVREVTMFVFKIKIPPAVRVQLVNDLADIECFSVCAGALHIDVVVIESDDVVTAVAEEVTKDTLTKLVVGALSSGIFRRYKHKGMSARISVCTPTFCTVYAVSKGKLSIRQSDTQIDGSTTDNMSEISFSSSDSSNFTLGS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi229g00007 196 SUPERFAMILY post-AAA+ oligomerization domain-like 18 86 IPR008921 GO:0003677|GO:0006260
Vivi229g00007 196 Gene3D - 18 96 - -
Vivi229g00007 196 PANTHER OS02G0152300 PROTEIN 89 183 - -
Vivi229g00007 196 FunFam Replication factor C subunit 5 18 98 - -
Vivi229g00007 196 MobiDBLite consensus disorder prediction 170 196 - -
Vivi229g00007 196 Pfam Replication factor C C-terminal domain 18 85 IPR013748 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi229g00007 3 85 Core DNA Replication Machinery Family AT1G77470 72.289 4.30e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi229g00007 K10756 - vvo:131639594 164.081