Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi229g00005 ATGGAGGCCACGGCCGCCGCAGCCGCTGCTCGCGGCGTTTCTCTTCAGTTGCAGACTCCGCCGAGGAAAGAATGGCGCGTTGTTTCTGAACATCATCATTCCGCCAGAAACCCTGACGGTGAGTCAACACACATGGCCTCTCAGCAGATAACAGAAGAAGCTGTTTACCTTTGCACTGGAAATCCATTGCCCAAAGACATTGAGCAAATATCTTACTGGCTTCTAAATGAACAATATTCAGAGAGCTTTAAAAGAATTAATGATTTGAAAACAAGGAAAGGGCTGACCCTTGTTGATATTGTAAGAGAAGTGACAATGTTTGTATTTAAGATTAAGATACCTCCAGCTGTTCGAGTGCAATTGGTGAATGATTTGGCTGACATAGAATGTTTTAGTGTTTGTGCAGGTGCATTGCATATAGATGTTGTAGTGATTGAATCAGATGATGTAGTAACTGCGGTAGCAGAGGAAGTAACTAAGGACACTTTAACCAAACTTGTCGTTGGAGCTTTGTCTTCTGGTATTTTCAGAAGGTATAAACATAAGGGTATGTCTGCAAGAATCTCAGTATGCACTCCAACATTTTGTACGGTTTACGCTGTTTCAAAGGGAAAATTGTCCATACGGCAATCAGACACACAAATTGATGGAAGTACTACGGATAACATGAGTGAAATCAGTTTTTCCTCAAGCGACTCATCAAACTTCACTCTAGGTTCTTGA 723 0.4191 MEATAAAAAARGVSLQLQTPPRKEWRVVSEHHHSARNPDGESTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRINDLKTRKGLTLVDIVREVTMFVFKIKIPPAVRVQLVNDLADIECFSVCAGALHIDVVVIESDDVVTAVAEEVTKDTLTKLVVGALSSGIFRRYKHKGMSARISVCTPTFCTVYAVSKGKLSIRQSDTQIDGSTTDNMSEISFSSSDSSNFTLGS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi229g00005 240 MobiDBLite consensus disorder prediction 214 240 - -
Vivi229g00005 240 Gene3D - 62 140 - -
Vivi229g00005 240 FunFam Replication factor C subunit 5 62 141 - -
Vivi229g00005 240 Pfam Replication factor C C-terminal domain 62 129 IPR013748 -
Vivi229g00005 240 PANTHER OS02G0152300 PROTEIN 133 213 - -
Vivi229g00005 240 SUPERFAMILY post-AAA+ oligomerization domain-like 62 130 IPR008921 GO:0003677|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi229g00005 41 129 Core DNA Replication Machinery Family AT1G77470 67.010 3.98e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi229g00005 K10756 - vvo:131639594 171.014