Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi227g00004 ATGGGTATTGAAAATGGAAATTTCACTGTGAGTATAACAAATGAAGAAGTGGTAGCAGCAGCGTTACCATTTCATGAACATTCCCTCCCACTCTCTAATCTTGACTTACTTCTACCTAAAGTAGATGTTGGAGTTTTCTTTTGTTACAAGAATCCCATGTTGTCGTCGACATCGATAACATTAATAACTTTTGAATCTATGGTTGTGTCTCTCAAAAAGGCATTGGCTAAGGTTTTGGTATCTTACTATGTTTTTGCAGGTGAAGTTGTGTCCAACTCTTTGGGGGAACCTGAGCTTCTTTGTAATAATCGTGGGGTTGATTTTGTTGAAGCTGTGGCTGATATTGAGCTGAAATGTCTCAACTTTTATAATCCTGATGAATCTGTTGAGGGAAAGCTGGTTCCAAAGAAGAAGCATGGCGTGTTCGTTATACAGGCAACCTCATTGAAGTGTGGTGGGATAGTAGTGGCATGCACATTTGATCATCGCATAGCAGATGCTTATTCAACAAACATGTTTTTAGTTTCATGGGCCGAGATGGCCCATCCCACAAAGCCCATGAAGCCCACAACCATAACAACAACTAACAAACCATGTTTTCGCCGCTCCCTCCTCAGCCCTCGTGGTTATCCAACTTCCATCCACCATTCCATCAACGACATGTACATTCCCATTTCCAAACTCCCTCCTCCTTCATCCACCACTACCAAACCATTACTCAGTCGTATATACTATGTCACTGGAGAGAATCTCTACCGCTTGCAAAAACTCGCTGGTGCGACTTGCAATGGTAGTAATTATAATACCAAGCCTACAAAGCTTGAGTCTTTCTCTGCCTACTTGTGGAAGTTGATTGCTCATGCAGCTATAAAGGAGGATAGTAAAATGGCCATTGCCAAAATGGGTATAGTGGTTGATGGAAGAAAGAGACTTGAAAATTATAGTATTGGTGAAGAAATGACCAACTATTTTGGAAATGTTCTTTCTATACCTTTTGGTGCAAAACCGATAGAGGAGTTGGTTGATAAACCATTAGGATGGGTGGTTGATGACGTTCGTGAGTTCGTATCTATAGCAACAACAGAGGAGCATTTCTTAGGACTCATTGATTGGGTTGAAATGAATCGACCAATCCCTGGATTGGCTAAGATTTACTGTGGTGGCTCTAAGGAAGGGCCAGCTTTTGTGGTGTCTTCCGGACAAAGATTTCCTGAAGAAAAAATGAACTTCGGGTGGGGGGAAGTTGTGTTTGGATCTTACCATTTTCCTTGGTGTGGTGAAGCTGGTTATGTGATGCCAATGCCAAGCCCTTTAAGGAATGGTGATTGGATTGTGTACATGCACCTTTTGAAACAGCATTTGGAGATCATAGAGTCGAAGGCAGGCCACGTCTTTGTCCCATTAACATGGGATTATCTTAAACAGGGATGA 1431 0.4193 MGIENGNFTVSITNEEVVAAALPFHEHSLPLSNLDLLLPKVDVGVFFCYKNPMLSSTSITLITFESMVVSLKKALAKVLVSYYVFAGEVVSNSLGEPELLCNNRGVDFVEAVADIELKCLNFYNPDESVEGKLVPKKKHGVFVIQATSLKCGGIVVACTFDHRIADAYSTNMFLVSWAEMAHPTKPMKPTTITTTNKPCFRRSLLSPRGYPTSIHHSINDMYIPISKLPPPSSTTTKPLLSRIYYVTGENLYRLQKLAGATCNGSNYNTKPTKLESFSAYLWKLIAHAAIKEDSKMAIAKMGIVVDGRKRLENYSIGEEMTNYFGNVLSIPFGAKPIEELVDKPLGWVVDDVREFVSIATTEEHFLGLIDWVEMNRPIPGLAKIYCGGSKEGPAFVVSSGQRFPEEKMNFGWGEVVFGSYHFPWCGEAGYVMPMPSPLRNGDWIVYMHLLKQHLEIIESKAGHVFVPLTWDYLKQG 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi227g00004 476 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 436 - -
Vivi227g00004 476 Pfam Transferase family 9 461 - -
Vivi227g00004 476 Gene3D - 223 460 IPR023213 -
Vivi227g00004 476 Gene3D - 5 220 IPR023213 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi227g00004 32 458 Monolignol Biosynthesis Gene Families AT5G48930 26.077 1.30e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi227g00004 - - tpra:123917257 759.985