Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi225g00006 ATGGGAATCAATAAACTTGAGGATCTAAGGTTGCAACAACGTGACATCAAGACACCGAAGCTATCAATAAATCAAGCAGAATTCCTACTTCGCTTCCACAGAGATCTTGAACGGATACGAATTGACAATGATATGTGTTTCGCCAATGTCATCAAGTGCATTCGACGTTCTTCAGATGAGACAGTTGCTATCAAGATTCTAACCATTCCTCAACACCAGCAAAAGAACGGAATTCCATCCACCATTTTGAATCACGCCTCTATCCTCAGAGATTTGAACCATCCCAATATCGTCAGCTTGTTGCAAGTTCTGGCTACTGAGAAAGATGTGTATCTTGTTTTTGATCATGTTGACCTAAATCTTGAAAAATACATCACCAATCCCGTGCTTAGCATTCACACTTTCGAAAGATCTGTTCTACGTCAAGCTCTTTCTGGACTGGCGTACCTTCACTCTCACAACATTGTACACACAGATATCAATCCTTTTAGTATTCTCTTTCAATACAACAACCTAGGTGAATCTCCTATAGTGAAGCTATGTGGTATTTGTGCACCCAAAACTTCTTTTCATAAGGCTCATCCTAGCTATACAGCACCTGAACTTTTGATGGGCTCAACCAATTACTCAACTGCAGCTGATATCTGGTCTATGGGCTGCATATTTGCTCACATCGTTAAGCGCCAACCGCTTTTCAATGATATAGACATGCATAGGGTATTGGCTGAGATATTCTGTTTGTTTGGTACCCCAACAGAAGAAACTTGGCCTGGGGTGTCGTCAATATGCAATTTTATTGGAGCATTTAACCCTCCAATACAGCCAAAGGATCTGGCTGAAGAGTTCCCAAGCTTCGAACCTGCTGGTCTTGATCTTCTTTCGAAAATGCTTTGCCTATGCCCAAATGGCAGGATTTCAGCTTATGAAGCTCTTGACCATCCATATCTTCGACATTGA 957 0.4148 MGINKLEDLRLQQRDIKTPKLSINQAEFLLRFHRDLERIRIDNDMCFANVIKCIRRSSDETVAIKILTIPQHQQKNGIPSTILNHASILRDLNHPNIVSLLQVLATEKDVYLVFDHVDLNLEKYITNPVLSIHTFERSVLRQALSGLAYLHSHNIVHTDINPFSILFQYNNLGESPIVKLCGICAPKTSFHKAHPSYTAPELLMGSTNYSTAADIWSMGCIFAHIVKRQPLFNDIDMHRVLAEIFCLFGTPTEETWPGVSSICNFIGAFNPPIQPKDLAEEFPSFEPAGLDLLSKMLCLCPNGRISAYEALDHPYLRH 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi225g00006 318 PANTHER CELL DIVISION PROTEIN KINASE 47 316 - -
Vivi225g00006 318 SUPERFAMILY Protein kinase-like (PK-like) 47 317 IPR011009 -
Vivi225g00006 318 Gene3D Transferase(Phosphotransferase) domain 1 133 318 - -
Vivi225g00006 318 ProSiteProfiles Protein kinase domain profile. 36 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi225g00006 318 Pfam Protein kinase domain 47 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi225g00006 318 Gene3D Phosphorylase Kinase; domain 1 48 118 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi225g00006 37 317 Core Cell Cycle Gene Families AT3G48750 37.457 5.54e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Vivi225g00006 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi225g00006 K02206 - psat:127128144 514.998