Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi224g00020 ATGGTGCACACAGATAATATTTCAAGTAAATTATCTTCTTTAGTCGATGTTAGTGCGAGTATCGATGAGGTGGTCGCAAAGGTGGTAGATGTCAGAGGTGACTTTATTAGCAAGCACGACCTTGATGATCGTGAAAGCATGCTAACATGGATTCGTCGGAAAGCAATTGACCTTGGATTTGGCGTGGTAATCGGAAGATCAAATAATGATACCGCAAGAAGAAATCCGTTTGTTACAATGTTGTGCGAGAGAAGCGGGAAATATAATCCTCCTCTAAAGAAGTTTAGAAAAGACGACACAGGAAATAGAGAAAGAACAACAGGACTAAAAGATGTGTCAACGGAAGTGGTTGATGAAACAGGTGAGACTACTATTGATGATATTAGTGCTGAGGATGGAGAATCCATTGAAAATATTATAAATATTGATAGTATGGAGGATATTCTTAGTATGGACTTGAAAAGACTAAGTCCCCATGAGACAAGAAAAATTCAATTTTCAAGTCTGGACATGGCTTATGCGTTCTACAACCAGTATGCTAAAATGAACGGGTTTGCAGTTTGCAAGAGCAATATCCTTCGAAGCAAGAAAGGAGAAACATTAGAGCGGATATTTGTTTGTCACAGACAAGGGTTTAGGGAGGATAGAGTTTTTAACGATTGGCACAACCATGATCTTTTACATGAAGAGTACCATGGAATGCTAGCTTCACATCGAAAAATGGAAGATTCAGATATAATGCAGATGAACGACATGTTGAAGGTTGGTATAAGACCGTCTCAATTCTATGGTTCGTGTGCCAACCAATCAGGAGGGTATGAAAAAATAGGGTTTCGTAGGAAAGATATATATAATCAGATAGGAAAGCAACGCCTTTTGCAACGATGTGATGGTAAAAATGCTTTGCACTATCTTCATGGACTGGCATCTGATGACCCGATGATGTTTTATCGCCACACTGTTGATGGAGAAGGTAGGCTTGAACACCTTTTTTGGTGCGATGGTATAAGCCAAATGAATTTCAAAGTTTTTGGCAATGTGTTGGCATTTGATGCAACATATGGGACGAACAAATACCATTGCCCTTTAGTGGTGTTTTCCGGAGTTAATAACCATAATCATAATATTATATTTGGTGGTGCCATTGTTGCAAATGAAAAAGAAGAAACATATGTGTGGGTTCTTGAACAAATTTTGGAAGCAATGTCAGGTAAGTCGCCTATATCTGTCATTACTGATGGCGATCTTGCAATGAAGAAAGCTATAAAAAGGGTGTTTCCGAATGCTTATCATAGGTTGTGTGCTTGGCATCTAATTCGCAATGCAATGTCTAACATTGGAGTTCCTGAATTTGTTGGTCAGTTTAGGAAATGCATGTTGGGTGACTATGACTTGGGTGAGTTTCGGCGCAAGTGGACTGACATGATTGACACATTTGGGTTGCATGACAACAAGTGGGTTACTGAACTGTATGCAAAGAGAAATATGTGGGCTACAGCGCATATACATGGAGGTTAA 1518 0.3926 MVHTDNISSKLSSLVDVSASIDEVVAKVVDVRGDFISKHDLDDRESMLTWIRRKAIDLGFGVVIGRSNNDTARRNPFVTMLCERSGKYNPPLKKFRKDDTGNRERTTGLKDVSTEVVDETGETTIDDISAEDGESIENIINIDSMEDILSMDLKRLSPHETRKIQFSSLDMAYAFYNQYAKMNGFAVCKSNILRSKKGETLERIFVCHRQGFREDRVFNDWHNHDLLHEEYHGMLASHRKMEDSDIMQMNDMLKVGIRPSQFYGSCANQSGGYEKIGFRRKDIYNQIGKQRLLQRCDGKNALHYLHGLASDDPMMFYRHTVDGEGRLEHLFWCDGISQMNFKVFGNVLAFDATYGTNKYHCPLVVFSGVNNHNHNIIFGGAIVANEKEETYVWVLEQILEAMSGKSPISVITDGDLAMKKAIKRVFPNAYHRLCAWHLIRNAMSNIGVPEFVGQFRKCMLGDYDLGEFRRKWTDMIDTFGLHDNKWVTELYAKRNMWATAHIHGG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi224g00020 505 Pfam MULE transposase domain 347 441 IPR018289 -
Vivi224g00020 505 PANTHER OS01G0519700 PROTEIN 164 219 - -
Vivi224g00020 505 Pfam FAR1 DNA-binding domain 175 217 IPR004330 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi224g00020 MULE 3.1e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi224g00020 - - vvo:131626876 1043.88