Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi222g00013 ATGGAAGCTATTCACAGAGAAAAACTCTTCTCACTCTCAAATTCCGTGAAGCTGTTGTTAGCCAAGATCGGTTCTACCGAGCTCGTCGACAGCTTCCGGAAGACGAAGCTCGACGCCTTACTCTTGACAAAGCTGAAAAGAAGATTAACAAGGATCGTAGTTCTACTCAACGATGACGCCGTTTTCAACGAATGGTTCGATATGGTGAGAGATGCTGTCTTTGAACTCGAAAGTTTGTTCGACGAAATCAACACCGAGGCATTGCGACGCAAAGTGGAAGCAGAGTATAAAACCCTAACTCCTTCTTCTACTTCCCTTTCTCAAGTGCTAAAATATTCTATTTATTCTCCTTTCAAACCTTTCAAACGGTTTAATAAAGTGATTAAGTCGAAATTGCTGAAATCAATTGAAAGATTAGAGTTATTGAGTTCAGGAAGTGGAGAGAAAGGTAAATTAGGTGTTCCCAATTCGAACGGTGTTTGGCTCGAAACTCCGGAAATTGAAAATTCTGATGTGCTTGATGAGAATTTTATTTATGGAAGAGATAGTGATATAAGCAAACTTAAAAGTTTTTTGTTGTCAGAAGATGATGATGCTAGTGAGGGTGATTGTAAAGTAAGAATGATTTCCATTGTAGGTATGGGAGGGATTGGTAAAACTGCCCTTGCTAAACTCCTTTACAATGATCCGCAAGTTAAGGAGAAATTTGGATTGAGAGGGTGGGCGCTTGTTTCGAAAGATTTTGTTGTTTTCAAGGTTTTGGAAGCCTTTCTTAATTCTATCGATTCACGGGATATCAGGAATGATGAGGTGAATCGGGAAGTTATTGAATTTGCTAACACAAAGAGAAATGAGCCTGGTGACCTTTACGCGAATCTTGTATTACTGATGTTCAAGAAAATTATTAGCAATAACTTGTTTTTGCTTGTATTGGATAATGTGTGGGGTGCGGAATCTGTCAATTGGACACATTTGATGAACATATTTAATGTTGGGGAAAAGGGAAGCAGGATCATCGTCACAACACGGGATGAAAGAATTGCACTATCCAAGGAAACTTTTCTTTCTGTCCACTACTTGAAACCTTTGACAAATGAAGATTGCTGGTTTTTACTTGCTAGAAATGCATTTGGAGCATGTGAAGATCCACAACAGTCCAATCTAGAAGAAATTGGCAAAGAAATTGCAAAAAAATGTTACGGGTTACCATTTCTTGCGGTGGCACTTGGGGATTTTCTACGCAACAAATTGTCCCCAGATTATTGGAATTATGTGCTAGAAAGTAACATTTGGGAATTGACAGATCATGACGTGCAACCTTTTCTACAATTGAGCTACAATTATCTTCCGACTCCTTTGAAACGATGTTTTGCATATTTTTCAATTTTTCCAAAGAAGTCCATCATAGAAAAAAATATGGTAGTTCAGTTGTGGATTGCAGAAGGCTTAGTAGAATCGTCTACAGACTCTACAGATCCAGAAAAAGTTGGAGAGGAATACTTTGATGTACTAGTGTCAAGATCGTTGATACATCGACGATCTATTGGTGATGAGGAAGCAACCTTTGAAATGCACGATGTCTTTCATGATTTAGCTATTGAGGTTTCATCTCCATATTGTATACATTTGGATGACCATAACCTACATGATGCGGTGCATAACTTATCATACAACAGAGGGATATATGACTCGCATGATAAATTTGATAAGTTGTATGGATTAAAAAGTCTACGTACCTTTCTAGCATTACCATTACAAGAACAATCGCCTCTTTGTTTGCTATCAAACAAGGTAGTAGAAGACTTGCTGCCAACAATGAAACAATTACGCGTCTTGTCTTTTTCGAACTACAAGAGTATCACTGAGGTTCCTAACTCTATTGGAAATTTGTTATACCTGCAGTACTTAAATCTTTCTCACACTAAGATTGAAAGATTGCCTTCTGAGACATGCAAGCTTTACAATTTGCAGTTTTTGTTGTTGGCAGGCTGTAAAAGGTTAACTGAATTGCCAGAGGACATAGGAAAATTGGTTAATCTGCGGCACCTTGACGTTAGTGACACTGCATTGAGGGAGATGCCCGTACAAATAGCCAAACTAGAGAATCTCCACACTTTATCTGACTTCGCTGTAAGCAAACATAATGATGGATTAAAGGTTTCAGAGTTGGGAAAATTTCCCCACCTCCATGGAAAACTTTCCATCTCACAACTACAGAATGTTAATGACCCCTCTGAAGTAGATCAAGCCAATTTAAAGATGAAAGAACTAATAGACAAATTAGCTTTGGAATGGGACTATGGTAATACTTTTCCAGATTCACAAATTAAAAGTGTTATACTTGAACATTTGCAACCCTCAACAAATTTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAACTTTCCAAATTGGCTGGGTGATTCTTCATTTAGAAACATGGTGTATTTAAGAATCTCGAATTGTAATGATTGTCTATGGCTTCCACCCCTTGGACAATTGAGTAATTTGAAAGAACTCATTATTGAAGGGATGCAATCAGTAGGGACAATTGGTATTGAATTCTATGGAAGTGGTGGTTCTTCATTTCAACCATTTCCCTCTTTGGAGAATCTACACTTTGAGAATATGCAAGAGTGGGAGGAATGGGACTTGATTAGAGGTACGACTACAACGTTTCCTAGTCTTAAAACTTTATCGCTTAGTAAGTGCCCAAAACTGATTGTAGGAAACATAGCTGACAAATTTCCTTCCTTAACTAAACTTGAGTTAAGTGAATGTCCTTTACTGGTGCAATCAATGCCATTATCTGATCGTGTATTCAGGCAACTGATGTTCCCTTTGAATTCTCTTCAACAGCTGACCATAGAGGGCATTCCATCTTCCATGTCTTTTCCATCAAACGGTCTACCAAAAACCTTGAAATTTCTCATAATCAGTAATTGTGAAAATCTAGAGTTCCTTCCTCATGATTACTTGTCCAATTACACATCGCTTGAGGAACTGAAAATATCTTATAGCTGCAATTCAATGACATCATTTGCCTTGGGTGCTCTCCCTGTACTGAAGAGTCTATTTATTGAGGGTTGTAAAAATCTGAAATCAATATTAATTGCAGAAGATACGTCACTGAAGTGTCTCTCATTTCTTAGAAGCATCAAAATATGGGATTGTACTGAACTGGAGTCATTTCCCCCAGGTGGATTGGCCACTCCAAACCTTGTTTATTTTGCAGTGTGGAAGTGTGAGAAGCTTCCTTCACTACCAGAAGCGATGCACACTCTAACTAACCTTCAAGAAATGGAAGTTGATAATCTACCAAATCTTCAATCTTTTGTCATAGATGATTTACCTAGCAGTTTGCAAGAACTGACTGTTGGCTCTGTTGGAGGGATCATGTGGAATACTAAGCCAACTTGGGAGCATCTCACTTGTCTTTCAGTGTTGCGAATTAACGACGACAATACAGTGACCACGCTGATGGGGCCATTTCTACCTTCATCTCTTGTGACACTATGCATTTGTGGTCTTGGTGATACAAGCTTTGAGGGGAAGTGGCTTCAACATCTCGATTATCTCCAAAATCTTGAGATTGTTAACGCTCCCAAACTTAAGACTTTGCCAAAAAAAGGATTGCCTTCATCTCTTTTAGTACTAAGTATAACTCGTTGTCCATTACTAGAAGCAAGTTTGCGGAGGAAGCGAGGGAGGGAGTGGCGTAAGATTGCTCACATTCCGGCTATAATTATCGATGACGAACTGATCACATAA 3774 0.3863 MEAIHREKLFSLSNSVKLLLAKIGSTELVDSFRKTKLDALLLTKLKRRLTRIVVLLNDDAVFNEWFDMVRDAVFELESLFDEINTEALRRKVEAEYKTLTPSSTSLSQVLKYSIYSPFKPFKRFNKVIKSKLLKSIERLELLSSGSGEKGKLGVPNSNGVWLETPEIENSDVLDENFIYGRDSDISKLKSFLLSEDDDASEGDCKVRMISIVGMGGIGKTALAKLLYNDPQVKEKFGLRGWALVSKDFVVFKVLEAFLNSIDSRDIRNDEVNREVIEFANTKRNEPGDLYANLVLLMFKKIISNNLFLLVLDNVWGAESVNWTHLMNIFNVGEKGSRIIVTTRDERIALSKETFLSVHYLKPLTNEDCWFLLARNAFGACEDPQQSNLEEIGKEIAKKCYGLPFLAVALGDFLRNKLSPDYWNYVLESNIWELTDHDVQPFLQLSYNYLPTPLKRCFAYFSIFPKKSIIEKNMVVQLWIAEGLVESSTDSTDPEKVGEEYFDVLVSRSLIHRRSIGDEEATFEMHDVFHDLAIEVSSPYCIHLDDHNLHDAVHNLSYNRGIYDSHDKFDKLYGLKSLRTFLALPLQEQSPLCLLSNKVVEDLLPTMKQLRVLSFSNYKSITEVPNSIGNLLYLQYLNLSHTKIERLPSETCKLYNLQFLLLAGCKRLTELPEDIGKLVNLRHLDVSDTALREMPVQIAKLENLHTLSDFAVSKHNDGLKVSELGKFPHLHGKLSISQLQNVNDPSEVDQANLKMKELIDKLALEWDYGNTFPDSQIKSVILEHLQPSTNLKSLTIKGYGGINFPNWLGDSSFRNMVYLRISNCNDCLWLPPLGQLSNLKELIIEGMQSVGTIGIEFYGSGGSSFQPFPSLENLHFENMQEWEEWDLIRGTTTTFPSLKTLSLSKCPKLIVGNIADKFPSLTKLELSECPLLVQSMPLSDRVFRQLMFPLNSLQQLTIEGIPSSMSFPSNGLPKTLKFLIISNCENLEFLPHDYLSNYTSLEELKISYSCNSMTSFALGALPVLKSLFIEGCKNLKSILIAEDTSLKCLSFLRSIKIWDCTELESFPPGGLATPNLVYFAVWKCEKLPSLPEAMHTLTNLQEMEVDNLPNLQSFVIDDLPSSLQELTVGSVGGIMWNTKPTWEHLTCLSVLRINDDNTVTTLMGPFLPSSLVTLCICGLGDTSFEGKWLQHLDYLQNLEIVNAPKLKTLPKKGLPSSLLVLSITRCPLLEASLRRKRGREWRKIAHIPAIIIDDELIT 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi222g00013 1257 Gene3D - 163 354 IPR027417 -
Vivi222g00013 1257 SUPERFAMILY L domain-like 948 1231 - -
Vivi222g00013 1257 PANTHER DISEASE RESISTANCE PROTEIN RP 44 897 IPR044974 GO:0006952
Vivi222g00013 1257 Gene3D Ribonuclease Inhibitor 969 1129 IPR032675 -
Vivi222g00013 1257 FunFam Probable disease resistance protein At1g63360 446 534 - -
Vivi222g00013 1257 Gene3D - 446 534 IPR036388 -
Vivi222g00013 1257 PRINTS Disease resistance protein signature 892 908 - -
Vivi222g00013 1257 PRINTS Disease resistance protein signature 399 413 - -
Vivi222g00013 1257 PRINTS Disease resistance protein signature 208 223 - -
Vivi222g00013 1257 Gene3D Ribonuclease Inhibitor 574 939 IPR032675 -
Vivi222g00013 1257 Gene3D - 363 445 IPR042197 -
Vivi222g00013 1257 Pfam NB-ARC domain 201 428 IPR002182 GO:0043531
Vivi222g00013 1257 SUPERFAMILY L domain-like 524 962 - -
Vivi222g00013 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 459 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi222g00013 601 715 WRKY Transcription Factor Family AT4G12020 33.621 2.57e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi222g00013 - - tpra:123913254 1630.15