Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi221g00003 ATGGAAAACATGGTCGTTGAAATGATCAATATTGTTGAACAAATTCATTCTCATGCTTTGATAGAAGATGCTTGCGACGTGATGATTTGGAAGCAGTTTACTATGGAAGCTTCTGCTTGTCAAAGTTATTCAGATCTTGGAGGATTGGTTCAACGACTGCAAAAGAGCAAAGTGCAGCACTATATAACGGAGGATTGGAAACTGAGTTGTTCTAAGTCTTGGTTTGATCCATGCGAGAAGGCAAAAAATGCAGAAATAATTGAGCTGCTAAATGAGAATGTAGCACCAGAACCAAAAGTAGGTTATGTACGGAAGACATGGAAGCATGATGTAATGAAATGGTTTTCAAGGAATCCTTTGTTTTCTAGCAGCATCGGCTCGCATCCACATGCTTCTAGTTATGGATTGTGCCAAACAAACTTTCAACTTGGTTTCAGAAGAGGCCTAAACTTCAAATTCACCATCCATGTGCATGTTCGACGCATAAAATGTACGGTGGAGGAGCCCATTGAAACCGAGTTTCCTAGTCAGTTGATGAATGAATTGAGTGATATGGCAGTCAAGGCTGTAGATTCTGATATCTTGCCCGTCACAGAAATGGTATCAAAGCCTATGGATGATGAAGAGGCTATTGAATTATTTGTAGAACCTGATACTGATAATACTAAGAGTCGACAGTGTGAAAAGTTTATCGAAGCCAAGGGAAGGCAATGTAGAGGACGAGCAATTGGTAGTGATAAATATTGTTGTGCTCATTTCTCAAGAAAACCTGCAAAAGAGGATAAAGCTCCTACCCCAATGTGTGGAGGTACAACTATGGCTGGTACTAAATGCAAGCATCATTCACATCCTGGCTTTTCATTCTGCAGAAAGCATTTAAGCAACGTTGAGACCAAAACTAGATCAAATTTGAAACGTCGTAGATCGAAAAGGAAAGCAAAAGTATACTGCAGTGGTTCGACATCGAAGAGAAGGGTTCGCGAAGACATAGGTATAGCACCTCCGAGAAGTCCATTGGATATTGATCCGGTATCGGTCATTGACGATGATTCTATTATTGCAAGGAACATTTTAGGTGAAACACTCGTGCTTTCTGGTAATGATTATAATGAGGCTCTTCAATGGATAGATTCTCCTCTTAATGACAATGATACTGATAATGATAATTCAATTAAGTGTAAGGTATGTTTTGAAGAATTTTCCGATGATCAATCACTTTGTAACAATTGGATGGAAAATCATGAAAGGGAAGCACATTGGTTATTCATGAGTTATGCTTGTGCAATTTGTCTTGATTCCTTCACCAACAAGAAACTATTGGAATCTCATGTTCCGAATAGACATCATGTGCAGTTCATTGAACACTGCTTGCTTTTAAAATGTAATGCTTGTAGTGGTAATTTTGGAAATATGGATGAATTCGGGTTGCATGTTAAATCAATCCACTCTTCCGAATTCAAGGTATCAAAAGCTCCTAAGCAACTAACATTGACACATGGTGATGATTCTCTGGAAATGATTGAGCACATAAATGAAGCTTCTTTGGAAGAACCTCAGCCTAACAATCTCAATATCTTATCGATTGCTTGCTCAAATTCCTGTGAAGTTAATCTTGAGGCGTCGTTGATGGAGAAATATGGATATTTACCAGAAAGACTTAATTTGAAGGCATCAGAAGATTGCAGTGAGAGAGAAATTCTTGAGAATTCGCATCAGGATGAGATCCACTCTGTCGCTAGTCCACACTCTTTAAAATCCAGCTCGTTGCAAAAGGCTATAGTTTTATGTGATTACATAAGCTTCAGGAATGAATCAACTCCAGTGATTTGTGTATTGGATCAAGAAATTCTCGTTTCTCTTTTTGAGAAATAG 1872 0.3846 MENMVVEMINIVEQIHSHALIEDACDVMIWKQFTMEASACQSYSDLGGLVQRLQKSKVQHYITEDWKLSCSKSWFDPCEKAKNAEIIELLNENVAPEPKVGYVRKTWKHDVMKWFSRNPLFSSSIGSHPHASSYGLCQTNFQLGFRRGLNFKFTIHVHVRRIKCTVEEPIETEFPSQLMNELSDMAVKAVDSDILPVTEMVSKPMDDEEAIELFVEPDTDNTKSRQCEKFIEAKGRQCRGRAIGSDKYCCAHFSRKPAKEDKAPTPMCGGTTMAGTKCKHHSHPGFSFCRKHLSNVETKTRSNLKRRRSKRKAKVYCSGSTSKRRVREDIGIAPPRSPLDIDPVSVIDDDSIIARNILGETLVLSGNDYNEALQWIDSPLNDNDTDNDNSIKCKVCFEEFSDDQSLCNNWMENHEREAHWLFMSYACAICLDSFTNKKLLESHVPNRHHVQFIEHCLLLKCNACSGNFGNMDEFGLHVKSIHSSEFKVSKAPKQLTLTHGDDSLEMIEHINEASLEEPQPNNLNILSIACSNSCEVNLEASLMEKYGYLPERLNLKASEDCSEREILENSHQDEIHSVASPHSLKSSSLQKAIVLCDYISFRNESTPVICVLDQEILVSLFEK 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi221g00003 623 SMART c2h2final6 459 482 IPR013087 -
Vivi221g00003 623 SMART c2h2final6 425 448 IPR013087 -
Vivi221g00003 623 ProSitePatterns Zinc finger C2H2 type domain signature. 461 482 IPR013087 -
Vivi221g00003 623 ProSiteProfiles Zinc finger C2H2 type domain profile. 459 487 IPR013087 -
Vivi221g00003 623 Gene3D Classic Zinc Finger 376 451 - -
Vivi221g00003 623 Pfam Zinc finger C2H2-type, 3 repeats 427 530 IPR040689 -
Vivi221g00003 623 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 516 574 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi221g00003 519 616 C2H2 Transcription Factor Family AT2G23740 29.861 1.57e-09 59.3