Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi220g00003 ATGTTGCTGCCAGAGCCAGAACTTAAATTAAAGAAAATGTTCCTTCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCGCAATTCAAAGCTTTCTACTCTCATCATCATCATCATCACAATCTTCATAACAGCAATAACTGCTGATCAAAACAACAATCACTGCAAGCGAAGATGCGGAAAACAAACCGTGAACTACCCATTCGGATTCTCAGAAGGATGCAAAATCGAATTAACCTGCAGCAACAACGACAATCAAATCAAAATTGGTAACTCAACGGTTCAAAAACTGAACTCTGATAGCATATTCATATCTCTACCAGCGAAATGCAACCGTAGCACCAGTTTCATATACCCGCTTTTCGGTAAAAACTATGCTCCAACCTGGAACAACACCTTCCTCGTCCAGAGATGTAACCCAAGTCTTAATGGTTGTGTTATTCCAACTTCGATTTTTGCTGGAACACGTACAGACGTTGAAGGTTGTGATTCAAGAAAAAGTGATAACATCACCTGCTTCACGCAATTACAGCGTAAGAGAAAACGTGAGGATGTTCTTACGGTTAATGATTGGAAGAAAACTGGATGTGAATTGTTGTTCTCTGCTATTGCTGTTGATGACAGCACAGTCGATGAGGTTCCGCTTCAGTTTCAGGTGGTTGAGTTAGGGTGGTGGCTTGAAGGTCCTTGTTTATGTACTGATGATGCTAATTGTACGGAGGTTCGTCTTGCCGGAGGAAAACAAGGTTTCCGGTGTCGTTGCCGGGAAGGTTTAGTCGGAGATGGATTTGTAAACGGTACTGGTTGCCAGAGAGCTTCACATTGCAGTCTTTCAACACTTGGGTCTAGCAAATGTGCAAAAGCACTCAGAATTGGTTTACTTCTTGGAGTGATCATAATTGGAGCCTCAGTGACGGCTGCACTGTCTCTAGTATGCTACTTCACGAATCGCCGATCGACATGGCTAACAAAACAACTGACAGTAAGGCGCCTATTAAGAGAAGCTGCAGGAAACTACATTGTTCCTCTCTACCCTTACAAAGAAGTAGAAAGGGCCACAAATTTTTTCTCTGAGAAACACAGGCTAGGAACTGGTGCTTACGGCACCGTTTACGCTGGAAACCTTCACAACAACGAATTGGTTGCTATAAAAAAAATCAGGTATAGAGACACCAACAGTGTTGACCAAGTTATGAATGAAATCAAACTCCTATCTTCGGTAAGTCACCCGAATTTAGTTCGACTTTTAGGTTGCTGCATAGAAAAAGGAGAACACATACTTGTTTACGAGTATATGCCAAATGGAACACTATCTCAACATTTACAAAGGGAAAGAGGTGGAACACTTCCTTGGACAATAAGACTCACCATTGCCTCTGAAACTGCTAATGCTGTAGCGTTTCTTCATTCTTCAAATCCTCCGATTTATCACAGAGACATAAAATCTAGTAACATACTATTGGACTTTAGTTTTCAATCAAAAGTAGCAGATTTCGGACTTTCTAGGCTAGGCATGACAGAAATATCACATATCTCAACCGCGCCACAAGGGACTCCAGGTTATGTTGATCCACAATACCATCAAAACTTTCATCTTTCAGATAAAAGTGATGTCTATAGTTTCGGAGTTGTTTTGGTAGAGATAATAACAGCGATGAAAGTGGTTGATTTTGGTAGACCTCAAAGTGAGATAAATTTGGCAGCACTTGCTATTGAAAAAATTAGGAAAGGCCGTGTCGACGACATCATAGATCCTTTCCTTGATCTTAATAGGGACGCATGGACACTCTATTCTGTTAACAAGGTAGCTGAGCTTGCGTTTAGATGCCTCGCTTTTCATAGCGAATCTAGGCCCAGTATGATTGAAGTTGCTGAGGAGTTAGATCATATCAGACGTAGCGGATGGGCGACAATGGAGGAAACTATATGCTTAGGCTCATCGGTTGGATCCGGGTGTTCATCACCTCGTTATAATGGAAATGAGAATTTAGTCTCAAAGAATGAAATCCTGGTTGTTCCACAAAAGACTAATAGTTTTTTGCATACAATAGAGGAAGTGAAGGATGGTTCTCCTGAATCTGTTCATGGTACTTGGTCAAGTAGACCTAGCTCACCTTCAACAAACAGCTTGTTAGGAAATGTTGTTCAGTGA 2169 0.4108 MLLPEPELKLKKMFLHHHHHHHHHHHHHHHHHRNSKLSTLIIIIITIFITAITADQNNNHCKRRCGKQTVNYPFGFSEGCKIELTCSNNDNQIKIGNSTVQKLNSDSIFISLPAKCNRSTSFIYPLFGKNYAPTWNNTFLVQRCNPSLNGCVIPTSIFAGTRTDVEGCDSRKSDNITCFTQLQRKRKREDVLTVNDWKKTGCELLFSAIAVDDSTVDEVPLQFQVVELGWWLEGPCLCTDDANCTEVRLAGGKQGFRCRCREGLVGDGFVNGTGCQRASHCSLSTLGSSKCAKALRIGLLLGVIIIGASVTAALSLVCYFTNRRSTWLTKQLTVRRLLREAAGNYIVPLYPYKEVERATNFFSEKHRLGTGAYGTVYAGNLHNNELVAIKKIRYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEKGEHILVYEYMPNGTLSQHLQRERGGTLPWTIRLTIASETANAVAFLHSSNPPIYHRDIKSSNILLDFSFQSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFGRPQSEINLAALAIEKIRKGRVDDIIDPFLDLNRDAWTLYSVNKVAELAFRCLAFHSESRPSMIEVAEELDHIRRSGWATMEETICLGSSVGSGCSSPRYNGNENLVSKNEILVVPQKTNSFLHTIEEVKDGSPESVHGTWSSRPSSPSTNSLLGNVVQ 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi220g00003 722 ProSiteProfiles Protein kinase domain profile. 362 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi220g00003 722 FunFam Wall-associated receptor kinase-like 20 438 646 - -
Vivi220g00003 722 FunFam Wall-associated receptor kinase-like 14 329 437 - -
Vivi220g00003 722 MobiDBLite consensus disorder prediction 694 722 - -
Vivi220g00003 722 SMART serkin_6 362 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi220g00003 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Vivi220g00003 722 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 40 706 IPR044652 GO:0004672
Vivi220g00003 722 Gene3D Phosphorylase Kinase; domain 1 341 437 - -
Vivi220g00003 722 Pfam Protein kinase domain 363 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi220g00003 722 SUPERFAMILY Protein kinase-like (PK-like) 344 633 IPR011009 -
Vivi220g00003 722 CDD STKc_IRAK 368 636 - -
Vivi220g00003 722 ProSitePatterns Protein kinases ATP-binding region signature. 368 391 IPR017441 GO:0005524
Vivi220g00003 722 Gene3D Transferase(Phosphotransferase) domain 1 438 648 - -
Vivi220g00003 722 MobiDBLite consensus disorder prediction 699 722 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi220g00003 40 720 Receptor kinase-like Gene Family AT2G23450 53.736 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vivi220g00003 Pkinase 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi220g00003 - - gmx:100810861 972.23