Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi220g00002 ATGTTGCTGCCAGAGCCAGAACTTAAATTAAAGAAAATGTTCCTTCATCATCATCATCACAATTCAAAGCTTTCTACTCTCATCATCATCATCATCACAATCTTCATAACAGCAATAACTGCTGATCAAAACAACAATCACTGCAAGCGAAGATGCGGAAAACAAACCGTGAACTACCCATTCGGATTCTCAGAAGGATGCAAAATCGAATTAACCTGCAGCAACAACGACAATCAAATCAAAATTGGTAACTCAACGGTTCAAAAACTGAACTCTGATAGCATATTCATATCTCTACCAGCGAAATGCAACCGTAGCACCAGTTTCATATACCCGCTTTTCGGTAAAAACTATGCTCCAACCTGGAACAACACCTTCCTCGTCCAGAGATGTAACCCAAGTCTTAATGGTTGTGTTATTCCAACTTCGATTTTTGCTGGAACACGTACAGACGTTGAAGGTTGTGATTCAAGAAAAAGTGATAACATCACCTGCTTCACGCAATTACAGCGTAAGAGAAAACGTGAGGATGTTCTTACGGTTAATGATTGGAAGAAAACTGGATGTGAATTGTTGTTCTCTGCTATTGCTGTTGATGACAGCACAGTCGATGAGGTTCCGCTTCAGTTTCAGGTGGTTGAGTTAGGGTGGTGGCTTGAAGGTCCTTGTTTATGTACTGATGATGCTAATTGTACGGAGGTTCGTCTTGCCGGAGGAAAACAAGGTTTCCGGTGTCGTTGCCGGGAAGGTTTAGTCGGAGATGGATTTGTAAACGGTACTGGTTGCCAGAGAGCTTCACATTGCAGTCTTTCAACACTTGGGTCTAGCAAATGTGCAAAAGCACTCAGAATTGGTTTACTTCTTGGAGTGATCATAATTGGAGCCTCAGTGACGGCTGCACTGTCTCTAGTATGCTACTTCACGAATCGCCGATCGACATGGCTAACAAAACAACTGACAGTAAGGCGCCTATTAAGAGAAGCTGCAGGAAACTACATTGTTCCTCTCTACCCTTACAAAGAAGTAGAAAGGGCCACAAATTTTTTCTCTGAGAAACACAGGCTAGGAACTGGTGCTTACGGCACCGTTTACGCTGGAAACCTTCACAACAACGAATTGGTTGCTATAAAAAAAATCAGGTATAGAGACACCAACAGTGTTGACCAAGTTATGAATGAAATCAAACTCCTATCTTCGGTAAGTCACCCGAATTTAGTTCGACTTTTAGGTTGCTGCATAGAAAAAGGAGAACACATACTTGTTTACGAGTATATGCCAAATGGAACACTATCTCAACATTTACAAAGGGAAAGAGGTGGAACACTTCCTTGGACAATAAGACTCACCATTGCCTCTGAAACTGCTAATGCTGTAGCGTTTCTTCATTCTTCAAATCCTCCGATTTATCACAGAGACATAAAATCTAGTAACATACTATTGGACTTTAGTTTTCAATCAAAAGTAGCAGATTTCGGACTTTCTAGGCTAGGCATGACAGAAATATCACATATCTCAACCGCGCCACAAGGGACTCCAGGTTATGTTGATCCACAATACCATCAAAACTTTCATCTTTCAGATAAAAGTGATGTCTATAGTTTCGGAGTTGTTTTGGTAGAGATAATAACAGCGATGAAAGTGGTTGATTTTGGTAGACCTCAAAGTGAGATAAATTTGGCAGCACTTGCTATTGAAAAAATTAGGAAAGGCCGTGTCGACGACATCATAGATCCTTTCCTTGATCTTAATAGGGACGCATGGACACTCTATTCTGTTAACAAGGTAGCTGAGCTTGCGTTTAGATGCCTCGCTTTTCATAGCGAATCTAGGCCCAGTATGATTGAAGTTGCTGAGGAGTTAGATCATATCAGACGTAGCGGATGGGCGACAATGGAGGAAACTATATGCTTAGGCTCATCGGTTGGATCCGGGTGTTCATCACCTCGTTATAATGGAAATGAGAATTTAGTCTCAAAGAATGAAATCCTGGTTGTTCCACAAAAGACTAATAGTTTTTTGCATACAATAGAGGAAGTGAAGGATGGTTCTCCTGAATCTGTTCATGGTACTTGGTCAAGTAGACCTAGCTCACCTTCAACAAACAGCTTGTTAGGAAATGTTGTTCAGTGA 2130 0.4117 MLLPEPELKLKKMFLHHHHHNSKLSTLIIIIITIFITAITADQNNNHCKRRCGKQTVNYPFGFSEGCKIELTCSNNDNQIKIGNSTVQKLNSDSIFISLPAKCNRSTSFIYPLFGKNYAPTWNNTFLVQRCNPSLNGCVIPTSIFAGTRTDVEGCDSRKSDNITCFTQLQRKRKREDVLTVNDWKKTGCELLFSAIAVDDSTVDEVPLQFQVVELGWWLEGPCLCTDDANCTEVRLAGGKQGFRCRCREGLVGDGFVNGTGCQRASHCSLSTLGSSKCAKALRIGLLLGVIIIGASVTAALSLVCYFTNRRSTWLTKQLTVRRLLREAAGNYIVPLYPYKEVERATNFFSEKHRLGTGAYGTVYAGNLHNNELVAIKKIRYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEKGEHILVYEYMPNGTLSQHLQRERGGTLPWTIRLTIASETANAVAFLHSSNPPIYHRDIKSSNILLDFSFQSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFGRPQSEINLAALAIEKIRKGRVDDIIDPFLDLNRDAWTLYSVNKVAELAFRCLAFHSESRPSMIEVAEELDHIRRSGWATMEETICLGSSVGSGCSSPRYNGNENLVSKNEILVVPQKTNSFLHTIEEVKDGSPESVHGTWSSRPSSPSTNSLLGNVVQ 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi220g00002 709 ProSiteProfiles Protein kinase domain profile. 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi220g00002 709 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 27 693 IPR044652 GO:0004672
Vivi220g00002 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Vivi220g00002 709 CDD STKc_IRAK 355 623 - -
Vivi220g00002 709 SUPERFAMILY Protein kinase-like (PK-like) 331 620 IPR011009 -
Vivi220g00002 709 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Vivi220g00002 709 FunFam Wall-associated receptor kinase-like 14 316 424 - -
Vivi220g00002 709 MobiDBLite consensus disorder prediction 681 709 - -
Vivi220g00002 709 FunFam Wall-associated receptor kinase-like 20 425 633 - -
Vivi220g00002 709 SMART serkin_6 349 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi220g00002 709 Gene3D Transferase(Phosphotransferase) domain 1 425 635 - -
Vivi220g00002 709 MobiDBLite consensus disorder prediction 686 709 - -
Vivi220g00002 709 Gene3D Phosphorylase Kinase; domain 1 328 424 - -
Vivi220g00002 709 Pfam Protein kinase domain 350 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi220g00002 20 707 Receptor kinase-like Gene Family AT2G23450 53.571 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vivi220g00002 Pkinase 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi220g00002 - - gmx:100810861 973.77