Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi220g00001 ATGTTGCTGCCAGAGCCAGAACTTAAATTAAAGAAAATGTTCCTTCATCATCATCATCATCATCATCGCAATTCAAAGCTTTCTACTCTCATCATCATCATCATCACAATCTTCATAACAGCAATAACTGCTGATCAAAACAACAATCACTGCAAGCGAAGATGCGGAAAACAAACCGTGAACTACCCATTCGGATTCTCAGAAGGATGCAAAATCGAATTAACCTGCAGCAACAACGACAATCAAATCAAAATTGGTAACTCAACGGTTCAAAAACTGAACTCTGATAGCATATTCATATCTCTACCAGCGAAATGCAACCGTAGCACCAGTTTCATATACCCGCTTTTCGGTAAAAACTATGCTCCAACCTGGAACAACACCTTCCTCGTCCAGAGATGTAACCCAAGTCTTAATGGTTGTGTTATTCCAACTTCGATTTTTGCTGGAACACGTACAGACGTTGAAGGTTGTGATTCAAGAAAAAGTGATAACATCACCTGCTTCACGCAATTACAGCGTAAGAGAAAACGTGAGGATGTTCTTACGGTTAATGATTGGAAGAAAACTGGATGTGAATTGTTGTTCTCTGCTATTGCTGTTGATGACAGCACAGTCGATGAGGTTCCGCTTCAGTTTCAGGTGGTTGAGTTAGGGTGGTGGCTTGAAGGTCCTTGTTTATGTACTGATGATGCTAATTGTACGGAGGTTCGTCTTGCCGGAGGAAAACAAGGTTTCCGGTGTCGTTGCCGGGAAGGTTTAGTCGGAGATGGATTTGTAAACGGTACTGGTTGCCAGAGAGCTTCACATTGCAGTCTTTCAACACTTGGGTCTAGCAAATGTGCAAAAGCACTCAGAATTGGTTTACTTCTTGGAGTGATCATAATTGGAGCCTCAGTGACGGCTGCACTGTCTCTAGTATGCTACTTCACGAATCGCCGATCGACATGGCTAACAAAACAACTGACAGTAAGGCGCCTATTAAGAGAAGCTGCAGGAAACTACATTGTTCCTCTCTACCCTTACAAAGAAGTAGAAAGGGCCACAAATTTTTTCTCTGAGAAACACAGGCTAGGAACTGGTGCTTACGGCACCGTTTACGCTGGAAACCTTCACAACAACGAATTGGTTGCTATAAAAAAAATCAGGTATAGAGACACCAACAGTGTTGACCAAGTTATGAATGAAATCAAACTCCTATCTTCGGTAAGTCACCCGAATTTAGTTCGACTTTTAGGTTGCTGCATAGAAAAAGGAGAACACATACTTGTTTACGAGTATATGCCAAATGGAACACTATCTCAACATTTACAAAGGGAAAGAGGTGGAACACTTCCTTGGACAATAAGACTCACCATTGCCTCTGAAACTGCTAATGCTGTAGCGTTTCTTCATTCTTCAAATCCTCCGATTTATCACAGAGACATAAAATCTAGTAACATACTATTGGACTTTAGTTTTCAATCAAAAGTAGCAGATTTCGGACTTTCTAGGCTAGGCATGACAGAAATATCACATATCTCAACCGCGCCACAAGGGACTCCAGGTTATGTTGATCCACAATACCATCAAAACTTTCATCTTTCAGATAAAAGTGATGTCTATAGTTTCGGAGTTGTTTTGGTAGAGATAATAACAGCGATGAAAGTGGTTGATTTTGGTAGACCTCAAAGTGAGATAAATTTGGCAGCACTTGCTATTGAAAAAATTAGGAAAGGCCGTGTCGACGACATCATAGATCCTTTCCTTGATCTTAATAGGGACGCATGGACACTCTATTCTGTTAACAAGGTAGCTGAGCTTGCGTTTAGATGCCTCGCTTTTCATAGCGAATCTAGGCCCAGTATGATTGAAGTTGCTGAGGAGTTAGATCATATCAGACGTAGCGGATGGGCGACAATGGAGGAAACTATATGCTTAGGCTCATCGGTTGGATCCGGGTGTTCATCACCTCGTTATAATGGAAATGAGAATTTAGTCTCAAAGAATGAAATCCTGGTTGTTCCACAAAAGACTAATAGTTTTTTGCATACAATAGAGGAAGTGAAGGATGGTTCTCCTGAATCTGTTCATGGTACTTGGTCAAGTAGACCTAGCTCACCTTCAACAAACAGCTTGTTAGGAAATGTTGTTCAGTGA 2139 0.4119 MLLPEPELKLKKMFLHHHHHHHRNSKLSTLIIIIITIFITAITADQNNNHCKRRCGKQTVNYPFGFSEGCKIELTCSNNDNQIKIGNSTVQKLNSDSIFISLPAKCNRSTSFIYPLFGKNYAPTWNNTFLVQRCNPSLNGCVIPTSIFAGTRTDVEGCDSRKSDNITCFTQLQRKRKREDVLTVNDWKKTGCELLFSAIAVDDSTVDEVPLQFQVVELGWWLEGPCLCTDDANCTEVRLAGGKQGFRCRCREGLVGDGFVNGTGCQRASHCSLSTLGSSKCAKALRIGLLLGVIIIGASVTAALSLVCYFTNRRSTWLTKQLTVRRLLREAAGNYIVPLYPYKEVERATNFFSEKHRLGTGAYGTVYAGNLHNNELVAIKKIRYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEKGEHILVYEYMPNGTLSQHLQRERGGTLPWTIRLTIASETANAVAFLHSSNPPIYHRDIKSSNILLDFSFQSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFGRPQSEINLAALAIEKIRKGRVDDIIDPFLDLNRDAWTLYSVNKVAELAFRCLAFHSESRPSMIEVAEELDHIRRSGWATMEETICLGSSVGSGCSSPRYNGNENLVSKNEILVVPQKTNSFLHTIEEVKDGSPESVHGTWSSRPSSPSTNSLLGNVVQ 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi220g00001 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Vivi220g00001 712 CDD STKc_IRAK 358 626 - -
Vivi220g00001 712 ProSiteProfiles Protein kinase domain profile. 352 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi220g00001 712 MobiDBLite consensus disorder prediction 684 712 - -
Vivi220g00001 712 Pfam Protein kinase domain 353 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi220g00001 712 Gene3D Phosphorylase Kinase; domain 1 331 427 - -
Vivi220g00001 712 SMART serkin_6 352 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi220g00001 712 FunFam Wall-associated receptor kinase-like 20 428 636 - -
Vivi220g00001 712 Gene3D Transferase(Phosphotransferase) domain 1 428 638 - -
Vivi220g00001 712 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 30 696 IPR044652 GO:0004672
Vivi220g00001 712 SUPERFAMILY Protein kinase-like (PK-like) 334 623 IPR011009 -
Vivi220g00001 712 FunFam Wall-associated receptor kinase-like 14 319 427 - -
Vivi220g00001 712 MobiDBLite consensus disorder prediction 689 712 - -
Vivi220g00001 712 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi220g00001 30 710 Receptor kinase-like Gene Family AT2G23450 53.736 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vivi220g00001 Pkinase 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi220g00001 - - gmx:100810861 972.23