Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi219g00025 ATGAAAACCCCCACCGGAACTCGACCTTCTCCGTCCACCGGACACGAAGACGGCTGGTCCGACGAGGCCACGTTCACACTCATCGACGTCTGGGGCAAACTTTACAAGAAGCTTAACCAAAAAAATTTCCTTCAGTCTCACTGGAAGGAGGTCGCAAAAGCCGTTAACAACCATCACGGCCACGACAGAAAAACGCGCCGCACTTACGTTCAGTGCAAAAGCCGAATCAACACGCTCAAGAAGAAGTATACGACCGAGAAGGCTAGGGTTTCTGATTCCAGCGGTTACGATAATGTATGGCCGTTTTTCGAGAAACTTGATTCGTTCATTGGAGATAATTTACCGCCGAAGAATCTCTCTTCGCCGTTTGATCCTCCCGTTGAGGTTCCGTCATGGGTGCTCGCGCCGGTCGGTCGTCGATCTGGCACTCAGAGTCAAAGCAGTCAGAAACAACCCGTGCCAGCGACATCGTCCTCTTTCAAGAGCTTGGATGAATCACGTTTTTGCAGGAATTTAGCTGCCTTTGCGGCTGCTGCAGCCGCGGAAGCAGAGATTGATGATTCGAATTCGGATAATTCAGATTCGGATGTGTTGGAGTTGAGCAATGAGAGCAAGAAGAGGAAGAGAGGAAGAAATGATAATTCAGATTCAGAAGAGTTGGAGTTGAGCAATGACATAGAGGTTGCAAGTGCTACAGAGAACTTTAGTGAGATACATGAGAGAGTGGACTCATCAAAGCAGAGAAAAAGTGTGGCTTTGGAGAAACAGAAGATGCAATTTTCAAAGGATTCTCAGAGGATGCAGCTTCCGAAAAGCAACAACTCAAAACACATGGATGATCTGTCACATCCTTCCCGAAGTGGGCTGGATACTCAGTCTACCAATAGAAAGGGTAAACGTGGTGCCACACTAATGAAAAAGTTAGCACTTGACCGTACTGATGGACAAAGGATATCGATTGAATTTGATCAATCAATTGGAAAACCGTTAGGGGAAAACAAGCACAAGTTCAAGAGTTATGTGGGTTTCCTTGGTCGAAGCAAAGTCAGTATTTTGACGGAGGATTGGGATTCTGTAGATGAGGACGTGAAGAACGACATTTGGACATCCATCCTGGAAGTATGGGATGTTCCTAATTCTGAGTTCTTGCGAAAGAAATGGATTTCATATGCAGGAGAACGTTGGAGGGCATTTAAGAATACTTTGACTTCTAGATATATACATGGGGATCTTAGTGATGAATCTCCTCTTGAGGTCTATAATTTTCTTAACGAAGAAATATGGCAGGCGTTTGTTCAAATGCGGCTGGACCCTTCCTTTCAGGAGAAAAGAAAGAAAGCGCAAATGGTCTCGGCCCATAATAAACACCCTCATAGATTGTCTCGTGGAGGGTATGAGTTGCTCCAGGAGAAGATGATTCAAGAGAAATTAAAAGAAAAACAAGAATCATTGGGAGATTCAGTAGTTGCACCTCCATCTCCACCAGCACGCCACGAGCAATGGAAGAGAGCCCGACAAAAGCCATCAGGAGATTACATAACAGAGGACACACGCATTGTTGCTGAGAAAATTGATTCTCTAGTTGAAAAAACATCTCAAGGAGCTTTTGTTCCACAAGGACGTAAAGATATTTTGGTAGAAGCCCTTGGCCAACCTGAGCACCCTGGCCGTGTTCGTGGTGTTGGTCGAGGTGTCGGTATTCTGCAATACTTTGGACCACATTCACGTAATGCCTCCACCCCGCCTGTTATTAGTAGCAAACAAATAGAGGCCATAAAAATGGAGCTCACTCAACAGATTAAAGAGGAATTGATGCAAGATCTGACATCTATGGGTTTCTCTAAGAATTTCCCAACTTGTCCTCCTAATACCGTTGTACCTGGGAGCCCGAAGAATAGTCACTCTACTGTGCTGTCTATACCAGAAGAGGATGAAATCCCAGAACAATGTGAACTGTATGTTGATAATTTAATTCATGCCGTGGCATATGGTACTGTTTACAAGTTAGGACCCACCATACATAAGCAATTGCTTGAAAAGGATTCGGTGAGGGTGGTGGTTAACGAGGTCCTAGATGCAAACGCTCAGGTGCCTATACCCACTGATGAGGTGGAAACGGTTGGGCATGCCCTTAACAATTTCATTCAATGGCCGACAAGACTTGTGCAAATTGTTTCTGATAAGGATGTTGATGGATCTGGGAATGAGGACGTCTCACCCAAAAGGCTGGACCCTCAATTAGATTCTGTTCAACAATTGGTTTTAAAGGCGATGGGTATGTCAGAATCTATAAAGCTCGAATTAGAACACGATAGAATGAAGTTTCTTTGGCTCTCACAAAGAGATATTATAGAGTTGTGTATGGGTAAACAAGAGTTATCCATAACTATTTTACGATTGTGGTTAACGTATTTGAATCGCCTTTCTATTAATGTGGGTAAGGGTGACTTGTATGGGTTTATTGATCCATGTTTTATTCAAAATCAACACAATCCATCTAAAGCTGAAGCCTACATACAGAATAAGTTTTACAATGATAAAAAAGAGTGTTACCTAGCTCCGTATCACAGCAATCGTCATTGGCAATTGCTCATTATTTGTCCTAAGAAGAATCATGTAGTATTCCTATGTTCTTTGGAAAGAAAGCCGGATAAAAATATTATTCACACTGTAGATTCAGCTTTGGAGGGATATCTTAAGCTGCAAGGAGTTCAAAATAAGAAGCCAGTATGGACTGTTCCAGTTTGTCAAAGACAACCTGACAATTACAAGTGCGGCTACTATATTATGATACATATGTTGAACATTGTATCTAATGGTATTATTGATCCATGGAAAAAGAAGTTATTTGGAAATCCAGAACCATTCCATGAAGATGAACTTATAAACGTCCGACAACGTTGCGCAAGTTTTATTCTTGAGTACATTATATGA 2934 0.4264 MKTPTGTRPSPSTGHEDGWSDEATFTLIDVWGKLYKKLNQKNFLQSHWKEVAKAVNNHHGHDRKTRRTYVQCKSRINTLKKKYTTEKARVSDSSGYDNVWPFFEKLDSFIGDNLPPKNLSSPFDPPVEVPSWVLAPVGRRSGTQSQSSQKQPVPATSSSFKSLDESRFCRNLAAFAAAAAAEAEIDDSNSDNSDSDVLELSNESKKRKRGRNDNSDSEELELSNDIEVASATENFSEIHERVDSSKQRKSVALEKQKMQFSKDSQRMQLPKSNNSKHMDDLSHPSRSGLDTQSTNRKGKRGATLMKKLALDRTDGQRISIEFDQSIGKPLGENKHKFKSYVGFLGRSKVSILTEDWDSVDEDVKNDIWTSILEVWDVPNSEFLRKKWISYAGERWRAFKNTLTSRYIHGDLSDESPLEVYNFLNEEIWQAFVQMRLDPSFQEKRKKAQMVSAHNKHPHRLSRGGYELLQEKMIQEKLKEKQESLGDSVVAPPSPPARHEQWKRARQKPSGDYITEDTRIVAEKIDSLVEKTSQGAFVPQGRKDILVEALGQPEHPGRVRGVGRGVGILQYFGPHSRNASTPPVISSKQIEAIKMELTQQIKEELMQDLTSMGFSKNFPTCPPNTVVPGSPKNSHSTVLSIPEEDEIPEQCELYVDNLIHAVAYGTVYKLGPTIHKQLLEKDSVRVVVNEVLDANAQVPIPTDEVETVGHALNNFIQWPTRLVQIVSDKDVDGSGNEDVSPKRLDPQLDSVQQLVLKAMGMSESIKLELEHDRMKFLWLSQRDIIELCMGKQELSITILRLWLTYLNRLSINVGKGDLYGFIDPCFIQNQHNPSKAEAYIQNKFYNDKKECYLAPYHSNRHWQLLIICPKKNHVVFLCSLERKPDKNIIHTVDSALEGYLKLQGVQNKKPVWTVPVCQRQPDNYKCGYYIMIHMLNIVSNGIIDPWKKKLFGNPEPFHEDELINVRQRCASFILEYII 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi219g00025 977 MobiDBLite consensus disorder prediction 238 301 - -
Vivi219g00025 977 Pfam Plant transposase (Ptta/En/Spm family) 424 564 IPR004252 -
Vivi219g00025 977 Pfam Ulp1 protease family, C-terminal catalytic domain 844 935 IPR003653 GO:0006508|GO:0008234
Vivi219g00025 977 Gene3D - 19 85 - -
Vivi219g00025 977 SUPERFAMILY Cysteine proteinases 754 974 IPR038765 -
Vivi219g00025 977 MobiDBLite consensus disorder prediction 183 225 - -
Vivi219g00025 977 MobiDBLite consensus disorder prediction 285 299 - -
Vivi219g00025 977 MobiDBLite consensus disorder prediction 480 509 - -
Vivi219g00025 977 MobiDBLite consensus disorder prediction 198 218 - -
Vivi219g00025 977 Pfam Myb/SANT-like DNA-binding domain 17 108 IPR044822 -
Vivi219g00025 977 PANTHER OS10G0338966 PROTEIN-RELATED 298 811 - -
Vivi219g00025 977 MobiDBLite consensus disorder prediction 238 261 - -
Vivi219g00025 977 Gene3D Adenoviral Proteinase; Chain A 764 975 - -
Vivi219g00025 977 MobiDBLite consensus disorder prediction 139 160 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi219g00025 8 181 Trihelix Transcription Factor Family AT3G14180 37.640 5.16e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi219g00025 Peptidase_C48 3.4e-05 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi219g00025 - - vvo:131653800 1862.04