Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi219g00024 ATGAAACCCCTCCCCAGAACTCGTCCGTCTCCGTCCACCGGTACCGGCGACGGCTGGTCCGAGGAGGCCACATTCACACTCATCGACGCCTGGGGAAAACTTTACAAGACGCTTAACCCTAGAAACCTCCGTCAGTATCACTGGAAGGACGTCGCAAAAGCCGTCAATGACAATCACGCCTTCGGCAGAAAAGCGCGCCGCACTTTCGATCAGTGCAAAAGCCGCATCAACGCGCTCAGGAAGAGGTACGATACCGAGAAAGCTAGGGTTTCTGATTCCGGCGATTACGATAACGCATGGCCGTTTTTCGACAAAATCAGTTCCGTCATTGGAGATCCTTTACCGGTGAGGAAGCTTTCGCCGCCGTCTGTCACTCCTGTTAGGGCTTCTGCATGGGCGCTTGCTCCGGTTGGTCGTCGATCTCGGACTCAGAGTCAGAGCAGTCTGAAACGACCTGCGCCGGGGATGACATCGACTTCGGAGAGCTTGGATGAATCGCGTTTTAACCGAAATTTAGCTGCCTTTGCTGCTGCGGCTGCTGCGGCCGCGGAAGAAGAGATTGATGATTCGAATTCGGATAATTCAGATTCAGATGAGTGGGAGTTGAGCAATGAGAGCCAGAAGAGGAATAGGGGAAGAAATGATATGGAATTAGGGCATAGAGAGGTTGCAAGTGCGGCAAAGAAGTTTAGTGAGATACATGAGAGAGTGAACACGCAGATTAAAAATGTGGCTTTGGAGAAACAGAAGATGCAATTTTCAAAGGATTCTCAGAGGATGCAGCTTCGTAAAAGCACACACTCAAAACACATGGATGATCTCTTAGCTCATTCCAAAAGTGGTTTAGATACTCAGTCTACCAACAGAAAGCGTAAACGTGGTCCCACACAAATGAAAAAGCTAGCAGTTATTGATGGACAAAAGATACCGATTGAATTTGATCAATTAACTGGTAAACCGTTGGGGGAAAACAAGACAAAGTTCAAGAGTTATTTGGGTTTCCTTAGTCGAAGCAAAATCAGTATTTTGATTAATGAATGGGATTCTGTAGATGAGGACGTCAAGGATGACATTTGGACAACCATCTTGGAAGTATGGGATGTTCCTAATTCTGGGTTCTTACGAAAGAAATTGATGTCATATGTGGGTGAACGGTGGAGGGGATTTAAGACTATTTTGACTTCCAAATATGTACATGGAGAGTATAGTGATAAATCTCCTCTTGAGGTCTATAGTTTTCTCAATGAAGAAATATGGGAGGCGTTTGTTCAATCGCGATTGGACCCTTCCTTTCAGGAGATAAGAAAGAAAGCGCAAATCAGTTCTTTTCTAAACAAACACCCTCACAGACTGTCTCGTGGGGGATATGAGTTGCTCCAGGAGAAGATAATGCAAGAGAAATCAAAACAAAAAGACGAATCATTGGGAGATTCAGTAGCTGCACCTCCATCTCCACCAACACGCCATGAACAATGGAAGAAAGCTCGGCAAAATGCATCAGGAGATTACATAACAGAGGACACACGCATTGTTGCCGAGAAAATTGATTCTCTTGTTGAAAAAGCATCTCAAGGAGCTTTTGTTCCACAAGGACGTAAAGATATTTTGGCAGAAGCCATTGGCCGACCTGACCACTCTGGTGGTGTTCGTGGTGTTGGTCGTGGTGTCGGTATTCGACAATACTTTGGGCCACAGTCACGTGAAGCCTCCACTCCATCTGTTTTTAGTAGCCAACAAATAGAGGCCATAAAAGTGGAGCTTACTCAACAAATTAGAGAGCAATTGATGCAGGATTTGTCATCTATGGGTTTCTCTAAGAATATACCAGCTTCTTCTCCTAATACCATTGTGCCTGCGAGCCCGAAGGGCAGTCACTCCATTGAGCCGCCTATAACAGAGGAGGATGAAATCCCAAAACAATGTGAATTGTATGTTGATAATTTAATTCATGCCGTGGCCTTTGGTAATGTTTACAAGTTAGGGCCCACCATACATAATCAAATGCTAGAAAATGATATGGTGAGGGTTGTGGTTAACGAGGTCCTAGATGCAAATGCTCAAGTGCCTATGCCCACAGATGAAGTGGAAACGGTTGGGCATGCTCTTAACAATTTCATTCAATGGCCGAAAAGACTTGTGCAAATTATTTCTGATAAGGATGCTGATGGATCCGGGGAAGAGGACGTTTCAGCCAAAAGCTTGGACCCTAAACTAGATTCCGTTCAACAATTGGTTTTAAAGGCAATGTGTATGTCAGAATCTATAAAGCTCGAATTGGAACACGAAAGGATGAAGTTTCTCTGGCTCTCACAGAGAGATATTATGGAATTGTGTATGGGTAAACAAGAGTTATCCATAACTATTCTACGACTGTGGTTAACGTATTTGAATCGCCTTTCTATTAATATGGGTAAGAGTGACCTGTATGGATTTATTGATCCATGTTTTATTCAAAGTCCACATGATCCAACTAAAGCTGAAACCTACATACAGAATAAGTTATACGATGATAAAAAAGAGTGTTACCTAGCTCCTTATCACAACAATCGTCAATGGCAATTGCTCATTGTTTGTCCTAAGAAGAATAATGTAGTATTCCTATGTTCGAAGGAAAGAAAGCCAGATAACAATATTGTTCGCACTATAGATACAGCTTTGGATGGATATCATAAGCGGCAAGGTGTTCAAAAGAAGAAGCCAACATGGAATGTCCCCGTCTGTCAAAGACAGCCTGGTACTTATGAAAGCGGCTACTATATTATGATACACATGTTGAACATTGTATCTGATGGTATTATTGATCCATGGAAAAAGAAGGTATTTGGAAATTCAGAACCATTCCATGAAGATGAACTTATAAACGTTCGACAACGTTTCGCTAGTTTTATTCTTGAGTATATGCTATAA 2907 0.4303 MKPLPRTRPSPSTGTGDGWSEEATFTLIDAWGKLYKTLNPRNLRQYHWKDVAKAVNDNHAFGRKARRTFDQCKSRINALRKRYDTEKARVSDSGDYDNAWPFFDKISSVIGDPLPVRKLSPPSVTPVRASAWALAPVGRRSRTQSQSSLKRPAPGMTSTSESLDESRFNRNLAAFAAAAAAAAEEEIDDSNSDNSDSDEWELSNESQKRNRGRNDMELGHREVASAAKKFSEIHERVNTQIKNVALEKQKMQFSKDSQRMQLRKSTHSKHMDDLLAHSKSGLDTQSTNRKRKRGPTQMKKLAVIDGQKIPIEFDQLTGKPLGENKTKFKSYLGFLSRSKISILINEWDSVDEDVKDDIWTTILEVWDVPNSGFLRKKLMSYVGERWRGFKTILTSKYVHGEYSDKSPLEVYSFLNEEIWEAFVQSRLDPSFQEIRKKAQISSFLNKHPHRLSRGGYELLQEKIMQEKSKQKDESLGDSVAAPPSPPTRHEQWKKARQNASGDYITEDTRIVAEKIDSLVEKASQGAFVPQGRKDILAEAIGRPDHSGGVRGVGRGVGIRQYFGPQSREASTPSVFSSQQIEAIKVELTQQIREQLMQDLSSMGFSKNIPASSPNTIVPASPKGSHSIEPPITEEDEIPKQCELYVDNLIHAVAFGNVYKLGPTIHNQMLENDMVRVVVNEVLDANAQVPMPTDEVETVGHALNNFIQWPKRLVQIISDKDADGSGEEDVSAKSLDPKLDSVQQLVLKAMCMSESIKLELEHERMKFLWLSQRDIMELCMGKQELSITILRLWLTYLNRLSINMGKSDLYGFIDPCFIQSPHDPTKAETYIQNKLYDDKKECYLAPYHNNRQWQLLIVCPKKNNVVFLCSKERKPDNNIVRTIDTALDGYHKRQGVQKKKPTWNVPVCQRQPGTYESGYYIMIHMLNIVSDGIIDPWKKKVFGNSEPFHEDELINVRQRFASFILEYML 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi219g00024 968 PANTHER OS10G0338966 PROTEIN-RELATED 303 802 - -
Vivi219g00024 968 MobiDBLite consensus disorder prediction 186 200 - -
Vivi219g00024 968 MobiDBLite consensus disorder prediction 1 20 - -
Vivi219g00024 968 Pfam Myb/SANT-like DNA-binding domain 18 108 IPR044822 -
Vivi219g00024 968 Gene3D Adenoviral Proteinase; Chain A 733 968 - -
Vivi219g00024 968 MobiDBLite consensus disorder prediction 135 165 - -
Vivi219g00024 968 Gene3D - 19 84 - -
Vivi219g00024 968 MobiDBLite consensus disorder prediction 183 218 - -
Vivi219g00024 968 SUPERFAMILY Cysteine proteinases 750 966 IPR038765 -
Vivi219g00024 968 MobiDBLite consensus disorder prediction 467 500 - -
Vivi219g00024 968 MobiDBLite consensus disorder prediction 201 218 - -
Vivi219g00024 968 MobiDBLite consensus disorder prediction 273 297 - -
Vivi219g00024 968 MobiDBLite consensus disorder prediction 139 165 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi219g00024 8 111 Trihelix Transcription Factor Family AT3G14180 45.192 1.84e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi219g00024 Myb_DNA-bind_4 3.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi219g00024 - - vvo:131653800 1478