Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi219g00022 ATGGAGGAGACACGAGAAGATGCAGGGCCGTCAGAACAAGGGTCATCTAATGTCAACGTATCATGGTGGCCTTCAGATTTTGTTGAAAAATTTGGATCTGTTGCTTTGGATTCTCAAGATGAGACAGTAATTAATAAAGAATCTTCTAGATACTCTGACAAAGATGTTTTGTCACCTCTGAAAGCATCACAAATTCTTTGGCGCACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTCATTCCGGAGACAAGACTCAAAGAACTTTTTGATAGTATTCCTACCTTGGACGAGCTTCATGCTTTGGACGGAGAGGGTTACAGAGCCGATATCATTCTCGTGGATTTAGAGAAAGATAAAAAACTATCCATGTTGAAGCAACTGATTGTGGCATTAGTTAAAGGATTAAACTCAAATCCAGCTGCAATAATTAAGAAGATAGCTGGATTGGTTTCTGATTTTTATAAGCGACCCAGTGTGGAAAGTCCAGCAAAAGCCGCGTTCGATGAAACCTCTCACATTTTTGAGAATCGAGGTGTCCAGATGCTGGGGCAAATAAAGCATGGTTCATGTCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTAGGTCTTGAAAGCAGACTAATGGTGGGCTTGCCAAATGACAGGGCTGTTGAATGCGTAGATTCATACAAGCATATGTCTGTTATAGTTGTATTAAATTCGACTGAAATGCTGGTTGACCTTATGCGATTTCCGGGTCAATTGTTACCAAAATCAATAAAGGCAGTTTTTATGAGTCATATATCCGCAGCAGGAGAGAGTGATTCTGCAGAAAACGATTCATGTGATTCGCCGTTAGAACCAAACAGTCCTTTATTTGGAGTTTCAGAGAGTACTGAGAAGGAGGAAAACCTTCAATTCTATAAAAGATTTGAAGCATCTTCAAATGTAACAGGCCTTTCCCTGAGAAATATGATGTTACGATCAAATAGCAGTTTGAGTTTGTCTCATAGTGAACCCAATATTACAACTTCATTTGGTCGGCGCAGTCGGAGAAAGGTTATTGCTGAGCAGAGGACAGCTAGTTCAAGTCCAGAACATCCATCATTTCGAGCACGTGCACGGTCCATGCTTAGTGGCGATAGGACAGAATTTAGAGATTTTGCCGATGACCAGGCTACATCAAGATCCAGCTATAGATCAGATGGTGCATCCTCATCAGAAGTTCGTAGAATACGAAGACGAAGCATCAGCATTACGCCAGAGATTGGGGATGATATCGTAAGGGCCGTACGTGCAATGAATGAAACACTAAAGCAAAATCGTCTTATGAGAGAGCGAGTGGATGATAATTCATTGTCCCATTCTCCAAACAATATAGTTAGTGATGCAAATCTTCAGAAAAAAGTGTCTAATTTCCATCATGGTCATGATGAAAGGCCTAGCTTATATTCTTTTCAGCGTGACCAAGTAACATCACAAAAGGCAACGTCATTACCATCTTCACCACATGACTATAGAAGTCACGCTTCTGAGAGAAGTGAGCTATCAAGATATGGAGTTAATGATGAAACAGAGTCGACCTGGAATAAAGTACTTGAGTCTCAAATGTACAATAACAAACCTTTATTGCCATATGAAGGATGGGATATTGACTTCTCAGAGTTAACTGTTGGAACTCGTGTAGGGATCGGCTTCTTTGGAGAAGTTTTTCGTGGCATATGGAATGGTACAGATGTTGCAATAAAGGTTTTTCTAGAGCAAGATTTAACCGCCGAAAACATGGAAGATTTCTGTAATGAAATATCTATTCTGAGCCGACTCCGACATCCTAATGTTATCTTATTTCTTGGTGCATGCACAAAGCCTCCACGTTTATCTATGGTTACGGAATATATGGAGATGGGATCATTGTATTACTTGATACATTTGAGTGGTCAGAAGAAAAAGCTCAGTTGGCGGAGACGACTAAAGATGATGCGTGACATATGCAAGGGTTTGATGTGCATACACCGTATGAAGATTGTACACCGTGATTTAAAAAGTGCAAATTGTCTAGTGAACAAGCATTGGACCGTGAAAATCTGTGATTTTGGGCTTTCAAGAATAATGATAGAGTCTCCAATCAGAGATTCTTCGTCAGCTGGAACTCCAGAATGGATGGCTCCTGAACTCATCCGAAATGAACCATTCGATGAAAAATGCGACATCTTTAGCCTTGGGGTGATACTGTGGGAGTTGTACAACTTGAACAGACCATGGGAAGGTGTACCACCTGAAAGGGTGGTTTATTCTGTTGCTCACGAGGGTTCCAGATTGGAGGTTCCTGAAGGTCCACTAGGCAGGCTGATTTCAGATTGTTGGGCAGACGCACATGAACGGCCAAGTTGTGATGAGATTCTCTCTCGTTTGATGGACATGGAGTACTCAACGTGTTGA 2439 0.4108 MEETREDAGPSEQGSSNVNVSWWPSDFVEKFGSVALDSQDETVINKESSRYSDKDVLSPLKASQILWRTGMLSEPIPNGFYSVIPETRLKELFDSIPTLDELHALDGEGYRADIILVDLEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRPSVESPAKAAFDETSHIFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMVGLPNDRAVECVDSYKHMSVIVVLNSTEMLVDLMRFPGQLLPKSIKAVFMSHISAAGESDSAENDSCDSPLEPNSPLFGVSESTEKEENLQFYKRFEASSNVTGLSLRNMMLRSNSSLSLSHSEPNITTSFGRRSRRKVIAEQRTASSSPEHPSFRARARSMLSGDRTEFRDFADDQATSRSSYRSDGASSSEVRRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLMRERVDDNSLSHSPNNIVSDANLQKKVSNFHHGHDERPSLYSFQRDQVTSQKATSLPSSPHDYRSHASERSELSRYGVNDETESTWNKVLESQMYNNKPLLPYEGWDIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGQKKKLSWRRRLKMMRDICKGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMIESPIRDSSSAGTPEWMAPELIRNEPFDEKCDIFSLGVILWELYNLNRPWEGVPPERVVYSVAHEGSRLEVPEGPLGRLISDCWADAHERPSCDEILSRLMDMEYSTC 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi219g00022 812 MobiDBLite consensus disorder prediction 381 411 - -
Vivi219g00022 812 CDD STKc_MAP3K-like 562 804 - -
Vivi219g00022 812 MobiDBLite consensus disorder prediction 1 20 - -
Vivi219g00022 812 Gene3D Phosphorylase Kinase; domain 1 549 634 - -
Vivi219g00022 812 FunFam Serine/threonine-protein kinase isoform 1 546 634 - -
Vivi219g00022 812 Pfam Ethylene-responsive protein kinase Le-CTR1 62 255 - -
Vivi219g00022 812 Gene3D Transferase(Phosphotransferase) domain 1 635 811 - -
Vivi219g00022 812 MobiDBLite consensus disorder prediction 331 348 - -
Vivi219g00022 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 675 687 IPR008271 GO:0004672|GO:0006468
Vivi219g00022 812 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 353 806 - -
Vivi219g00022 812 ProSitePatterns Protein kinases ATP-binding region signature. 562 583 IPR017441 GO:0005524
Vivi219g00022 812 MobiDBLite consensus disorder prediction 485 505 - -
Vivi219g00022 812 ProSiteProfiles Protein kinase domain profile. 556 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi219g00022 812 MobiDBLite consensus disorder prediction 331 351 - -
Vivi219g00022 812 MobiDBLite consensus disorder prediction 477 518 - -
Vivi219g00022 812 SUPERFAMILY Protein kinase-like (PK-like) 531 804 IPR011009 -
Vivi219g00022 812 Pfam Protein tyrosine and serine/threonine kinase 557 804 IPR001245 GO:0004672|GO:0006468
Vivi219g00022 812 SMART serkin_6 556 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi219g00022 1 812 MAP Kinase Kinase Kinase AT3G58640 69.259 0.0 1150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Vivi219g00022 PK_Tyr_Ser-Thr 3.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi219g00022 - - gmx:100803469 1394.79