Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi215g00003 ATGGAAATTGTAACTTCTGTTGTTGGAAAAGTAGCAGAGTTTACCGTTCTTCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGCCAATTTCAAAATGTTAGCTGATCATGTTAAAGATCTTGATGATGAAAGAGAAAGAATGACGCGTTTGGTTGAAGAAGAGGAGAGAAATGGTAAAACAATTTTTGAAGGTGTGGAGAGCTGGATTAAGAATGTGAAGGAGGTCACTGAAAGGGCGACTCAGCTTCAAAATGATCCACGTCATGCCAATGTTAGGTGCTCAGCAGCATGGCCGTTTCCTAATTTGATTTCGCGTCATCAACTAAGTAGGAAAGCCACAAAAATTGCAAAAGATGTTGTTCAAGTTCAAGGAAAAAAGATTTCTGATCCAGTTGGTTTCCTTCCTGCTTTAGATGGAGTCGCCTCTTCCTCCTCAACAAGAGGTGATGAAAAATATGAGACTAGGGAGTCACTCAAGCAGAAGATTATGAAGGCTTTAAAAGACCCTAATTCATGCAACATTGGGGTGTATGGGTTGGGTGGGGTGGGTAAGACCACTCTGGTGAAGGATGTTTTTCAAATAGCCAAGCAACAAAAATTGTTTGATGAAGTGGTTAAAACACATGTATCCAAAAATCCAGAATTGAAAACAATTCAAGGGGAGATTGCAGATATGTTGGGTCTGCGATTCCTTGAGGAGACTATTCAAGGCAGAGCTGATCGACTGAGACAGAGAATCAAGAAAGAGAAAAGTATCCTTATCATTCTAGATGATATATGGACCGTAATTGATTTGAAGGAAGTGGGAATTCCATTAATTGATGAGCATAATGGTTGCAAATTGTTGATGACAAGTAGAAATCAAGACGTGTTGGTGCAAATGGACGTTCCAGAGGATTTCGCTTTCAAACTTGAACTTATGAGTGAAAAAGAGACATGGAGCTTGTTTCAACTTATGGCTGGTGATGTGGTTAACAATAGGGATTTGAAAGATTTTGCAATTCAGGTTGCCCAAAAATGTGCAGGTTTGCCTCTTAGTATCACTACGGTAGCGCGTGCAATGAAAAATAAGAGGGATGTCCAATATTGGAAAGATGCATTAAGGAAATTACAATGTAATAATCACGAAGGGGTGCATGCGACAAGTTATTATGCTCTGGAGTTGAGTTACGACTCATTGGAAAGTGATGAAGTTAGGGATCTATTCTTGCTATATGCTTCAATTCCAAATCAAAATGTTGAGTATTATCTGAAAGTTGCAATGGGTTTGGACATATTAAATGATGTTAAAACCATTGATGATGCAAGAAACAAACATTACACAATAATCAAATCTTTGGAGGCGAGGTGTCTTTTGCTTGAAAGTAAAACAAGCGGATTGATCATAATGCATGACGTTGTTCGTGATTTTGCTACCTCCATAGCACGTAGAGATAAACATGTATTTTTAAGGAAATTTGCTGATGAGGAATGGCCAACCAATGATCTTTTAAACAGGTGCACCCAAATCATTCTACATAGGTGTCATCATATGGACGAGCTTCCACAAAGGATCGATTGTCCATGCATTAAATTTTTCTATTTGTGCAGTGAGAATCGATCTTTAGAAATCCCTCATACATTTTTTGAGGATATGAAAAGCCTTAAAATGCTAGATTTAACATCTTTGAACTTGCCTTCATTACCAACTTCGTTTCGGTTCCTAACGGACCTTAGATCGTTGTGTTTAGATTTCTGTGTTTTGGAAAATATGGATGCAATAGAAGCTTTGCAAAATTTAGAAATTCTCAGTCTCTGGAAATCTTCAATGATCATGTTACCAAGAGAAATAGGGAGATTGACTCAATTGAAAATGCTTGACTTGAGCAGCTCAGGAATAGAAGTAGTCCCACCCAACATCATATCAAGCTTGACTAAATTGGAGGAGTTGTACATGGGCAATACATCTAATATTAATTGGGCAGATGTGAATTCTACAGTTCAAAATGACAATGCTAGCATTTCCGAGCTTCGAAAACTACCCAACTTGACAGCTCTAGAATTACAAATTCGCGAGACTTGGATGTTGCCAAGGGACTTGCAACTGATGTTTGAGAAGCTGAAAAGATACAAAATAGCTATTGGAGATGTATGGGAATGGTCTGACATTGTGGTTGGAACCTTAAGAACATTGATGCTCAAACTTGGTACCTCGATACATTTGGAGCACGGAATTAAAGCATTGATTAAAAGTGTTGAGAATTTGTACATGGATGACGTGGATGGTATTCAAAATGTTCTTTATCAACTAAATGGGGAAGGATTCCCATATCTAAAACATCTCCACGTCCAAAATAATGCACACATGAACCACATAGTTGACTCTAAAGAGAGAAATCAAATCCATGTGTCCTTTCCCATCTTGGAAACTCTGGTACTTGATAATCTTAAAAACTTAGAGCATATATGTCATGGTCCACTTTCAGCTACTTCTTTTGGAAGTCTCAATGTTATCAAAGTCAAGAATTGCTTCCAGCTAAAATATCTTCTCTCCTTTACTTTGATTAAAGAACTTTCTCATCTTTCTAAGATCGAAGTTTGTCAGTGCAATTCTATGAAGGAGATAGTGTCCGCAGACAACAATTCAAGTGCAAATAATGAAAAAATTGAGTTTCTTCAATTGCATTCTTTGACTTTAGAACATTTGGAGACACTTGATAATTTCTTCTCTAATTATTTGACACACTCCACAACTATTCAAAAGTCTTTTTTCAATGCCCAGGTTGCATTTCCTAAATTGGATACCCTTAAATTGAGTTCTCTCAAGTTGAGTAAAATTTGGGATGATTATTCTATGTACAACTTGACTAGTTTGATTGTGGAGAATTGTGGCGGATTGAAGTACTTATTCTCTTCTACTGTTGTTGGAAGTTTTAAGAACCTCAAACACCTTGAAATAAGTAAGTGTCCTTTGATGGAGGAGGTAATAGCTAAAGAAGAGGGAAACAATCCGTTGGATGAGGTTCCTTTTTCCAAATTAGAGAAAATAATATTGAAGGACATGGTCAAATTGAAGACAATATGGCACCACCAGTTTGAGTCATTGAAGTCGTTGGAAGTGAACAATTGTGAGAAAATTGTGGTAGTTTTTCCTTCTTCAATTCAAACAACTTACAATAAGCTAGAGACTTTGGAGGTTACAAATTGTGCTTTTGTGGAAGAGATATTTGAGTTGACTTTCAACTGTGTAGAGGGTACATCTTATTTGAAAGAAGTTACTATAGATGGATTGCCGAAGCTGAAAAAGATATGGAGTAAGGATCCTCAAAGAATTCTTAGTTTTCAAAATCTAACAATTGTAAGATTACAGGGTTGTAAAAGTTTGGAGTATCTATTACCACTTTCTGTAGCTACTCGTTGTTCACATCTCAAAGAACTTGTGATAAAACAATGTAATTTCATGAATGAAATTGTTGCAGAGGAGAAAGAGTCAAGGCTGCGTGAAGCTCCCATATTTGAGTTTAACCAATTGAATACTCTAGTGCTTTGGAACTTGAACAAACTCAAATGTTTCTATGGTGGAAAACATACTCTATCATGTCCATCTTTGAGGAAAATCGATGTTTTCAAATGTTCAAAATTGAATTTGTATAGAACCCTTTCTACAAACAGCTCTAAAAGTAGTTTTCAACATGACAAGCTCTCCGTCATAACTCAACAACCACTTTTCATCGCCGAAGAGGTGATTCCAAACTTGGAGGAGTTGTGGATAGATCAAAAGGATGCTGAGATGATATTGCAAGCCCAAAACTCAAGTGCCCTTTTTACCAAACTGACCTTTCTTAGTTTAGAAAGGTATGAAAATGAAGAGGCTACATTTCCTTATTGGCTCCTTATTAATGTGCATAATCTTGAGCAGTTAGCTGTTCAGTGGAGTTGCTTCAAGAAAATATTTCAAGATGAAAGAGAAATAAGTGAGAAGACTCGTACACGGATTAAAAGGCTGTTTTTAAATGGATTACATAAACTTCAACATATATGTGAGGAAGGATCTAAAATTGACCCAATTCTTGAGTTCCTTGAACAATTACTGGTTTTTAGCTGTTCTAGTCTGACAAATTTGTTGCCTTCCTCTGTCACACTCAATCATTTGGTTCAGCTGGCGATAACATGTTGCAATGGGCTAAAAAAATTAATTACAACTCCTACGGCACAAAGTTTAGTCAAACTCACAATACTTGACGTAAGAGACTGTAAATCACTTGAAGAAATAATTATAGGAGTAGAAAATGTTAACGTTGCATTTATTAGTTTAAAAGTTCTGAGGTTGGAATGTTTGCCAAGCCTCAACAAATTTTGCTCTAGTAAGTGCTTCTTGAAGTTTCCATTGTTGGAGGTAGTAATTGTGAGAGAATGTCCTTACATGAAGATATTCTCAGAGGGAAACACAAGTACACCAAATCTTCGAAAAGTTAAAAATGCAGAAAATGAAGAGGAATGGCATTGGAAGGGAAACCTAAATGATACAATAAAAAAAATGTTTGAAGACAAGGTTGCATTTTCTAAATTCAAATATTTAGCCTTATCGGACCACCCTGTGCTAAAGGATTTATGGTATGGTCAAGTTGATCATCAGACTATATTTTGCAATATGAAACATCTAGTGGTGCAGAGATGTGATTTTTTATTAGATGTACTTTTTCCATCAAATGTTGTTCAAGTGCTATATTGTTTGGAAAAGCTAGAAGTAAAAGACTGTTATTCATTAGAAGCCATATTTGATGTTAAAGGTATGAAGTCTAATGAATCAACATTGATAAAACAAAGCTGTCAATTGAAAACCTTGACTTTGTCTTGCTTACCAAACTTAAAGCACATATGGAAAGAGGATCCTCATGAAATTATGAACTTTGGAAACATATGCTCAGTGGATGTTTCTTCATGCCAAAGCTTGTTATACATCTTTTCATTACCACTATGCCAAGATCTTGGAAATCTTGAAATGCTTAAGATAGATTCTTGTGGAGTCGAGGATATTGTTGCAATGAAAGAAGGATCAATGGAAATCACTTTTAATTTTCCACAACTAAATGCATTGGTACTTATTCGTTTGAAAAATCTAAAGAGTTTCTATCAAGGAAAACATACTTTAGAGTGCCCTTCATTGAAGAATTTGAATGTATATCTTTGTGAAACATTAAGAATGTTCTCCTTCAACAATTTAGATTTGCAACAACCTGATGAAAATTCTCAACAAGCCCTTTTTTCAATGGAAAAGCTGAGCACTAACTTGGAGTGTTTGTCAATAAATGCAAAGGATGCCTTTAAAATGTTGAATGATTACTCTCATCAAAATATCTTTCCTAAAATAGAAAGTCTTCACTTGCAACGCTTCAATGAAACTCCAACTATTCATCTGAATAATTTCCATGCGATATTTCCTAATCTAACAGCTCTTTCATTGTTTTATTGTTCTTTTGAAAAATTATTCCTTTCAAATGGAACTGCTGGAAATCTCAATAACAAACTTTCTAAACAAATAAAAGAGTTGGAGCTTTATGAACTAGAAAAGATCAAATACATCTGGCATGAAGATTTTCCTTTAGACAATTCTCTACTACAAGATCTTGAAAGTTTAAAAGTATGGAGTTGTCCAAGTTTGGTAAGTTTGGTACCATCGTCGTCATCTTTCACAAATCTAACCATTTTGGAGGTGAACAATTGCAAAGAGGTGATTTACTTGATAACATCTTCAACAGCTAAAAGCTTAGTTCAGCTCAGAGAATTAAAAATAAAGAAGTGTGAGAAGATGTTGGATGTTGTGAAGATTGATGATGAAAAAGTAGAGGAAGACATCATATTTGCAAAATTGGAAATCTTGAAGTTCATTACTTTGTTAAGCTTAAGAAACTTCTCCAATGGGAAACAAACATTCATATTCCCATCTTTGGCGCATTTCATTGTTAAAGGATGTCCTCAAATGAAGAATTTCTCATTAGGAGTCACGGAAGCACCATACCTGACAGGAATCGAAGTTGAAGACAAAAATATACAATGGAAAGGTGATCTTAACACAACTATTGAACAATTGTTCTTAGAAAAGGAAGCCTCACATTCTAATGGGACCATCATATCATCGTATTTGCAAGATGGTGAGATCGCAAGTGAAGATGGTATCAATGCAGAAGCTAAGGAGTGA 6186 0.3569 MEIVTSVVGKVAEFTVLPIGRQASYLIFYKANFKMLADHVKDLDDERERMTRLVEEEERNGKTIFEGVESWIKNVKEVTERATQLQNDPRHANVRCSAAWPFPNLISRHQLSRKATKIAKDVVQVQGKKISDPVGFLPALDGVASSSSTRGDEKYETRESLKQKIMKALKDPNSCNIGVYGLGGVGKTTLVKDVFQIAKQQKLFDEVVKTHVSKNPELKTIQGEIADMLGLRFLEETIQGRADRLRQRIKKEKSILIILDDIWTVIDLKEVGIPLIDEHNGCKLLMTSRNQDVLVQMDVPEDFAFKLELMSEKETWSLFQLMAGDVVNNRDLKDFAIQVAQKCAGLPLSITTVARAMKNKRDVQYWKDALRKLQCNNHEGVHATSYYALELSYDSLESDEVRDLFLLYASIPNQNVEYYLKVAMGLDILNDVKTIDDARNKHYTIIKSLEARCLLLESKTSGLIIMHDVVRDFATSIARRDKHVFLRKFADEEWPTNDLLNRCTQIILHRCHHMDELPQRIDCPCIKFFYLCSENRSLEIPHTFFEDMKSLKMLDLTSLNLPSLPTSFRFLTDLRSLCLDFCVLENMDAIEALQNLEILSLWKSSMIMLPREIGRLTQLKMLDLSSSGIEVVPPNIISSLTKLEELYMGNTSNINWADVNSTVQNDNASISELRKLPNLTALELQIRETWMLPRDLQLMFEKLKRYKIAIGDVWEWSDIVVGTLRTLMLKLGTSIHLEHGIKALIKSVENLYMDDVDGIQNVLYQLNGEGFPYLKHLHVQNNAHMNHIVDSKERNQIHVSFPILETLVLDNLKNLEHICHGPLSATSFGSLNVIKVKNCFQLKYLLSFTLIKELSHLSKIEVCQCNSMKEIVSADNNSSANNEKIEFLQLHSLTLEHLETLDNFFSNYLTHSTTIQKSFFNAQVAFPKLDTLKLSSLKLSKIWDDYSMYNLTSLIVENCGGLKYLFSSTVVGSFKNLKHLEISKCPLMEEVIAKEEGNNPLDEVPFSKLEKIILKDMVKLKTIWHHQFESLKSLEVNNCEKIVVVFPSSIQTTYNKLETLEVTNCAFVEEIFELTFNCVEGTSYLKEVTIDGLPKLKKIWSKDPQRILSFQNLTIVRLQGCKSLEYLLPLSVATRCSHLKELVIKQCNFMNEIVAEEKESRLREAPIFEFNQLNTLVLWNLNKLKCFYGGKHTLSCPSLRKIDVFKCSKLNLYRTLSTNSSKSSFQHDKLSVITQQPLFIAEEVIPNLEELWIDQKDAEMILQAQNSSALFTKLTFLSLERYENEEATFPYWLLINVHNLEQLAVQWSCFKKIFQDEREISEKTRTRIKRLFLNGLHKLQHICEEGSKIDPILEFLEQLLVFSCSSLTNLLPSSVTLNHLVQLAITCCNGLKKLITTPTAQSLVKLTILDVRDCKSLEEIIIGVENVNVAFISLKVLRLECLPSLNKFCSSKCFLKFPLLEVVIVRECPYMKIFSEGNTSTPNLRKVKNAENEEEWHWKGNLNDTIKKMFEDKVAFSKFKYLALSDHPVLKDLWYGQVDHQTIFCNMKHLVVQRCDFLLDVLFPSNVVQVLYCLEKLEVKDCYSLEAIFDVKGMKSNESTLIKQSCQLKTLTLSCLPNLKHIWKEDPHEIMNFGNICSVDVSSCQSLLYIFSLPLCQDLGNLEMLKIDSCGVEDIVAMKEGSMEITFNFPQLNALVLIRLKNLKSFYQGKHTLECPSLKNLNVYLCETLRMFSFNNLDLQQPDENSQQALFSMEKLSTNLECLSINAKDAFKMLNDYSHQNIFPKIESLHLQRFNETPTIHLNNFHAIFPNLTALSLFYCSFEKLFLSNGTAGNLNNKLSKQIKELELYELEKIKYIWHEDFPLDNSLLQDLESLKVWSCPSLVSLVPSSSSFTNLTILEVNNCKEVIYLITSSTAKSLVQLRELKIKKCEKMLDVVKIDDEKVEEDIIFAKLEILKFITLLSLRNFSNGKQTFIFPSLAHFIVKGCPQMKNFSLGVTEAPYLTGIEVEDKNIQWKGDLNTTIEQLFLEKEASHSNGTIISSYLQDGEIASEDGINAEAKE 2061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi215g00003 2061 Gene3D Ribonuclease Inhibitor 501 1001 IPR032675 -
Vivi215g00003 2061 FunFam Probable disease resistance protein At1g61300 143 302 - -
Vivi215g00003 2061 Coils Coil 68 88 - -
Vivi215g00003 2061 Gene3D - 143 302 IPR027417 -
Vivi215g00003 2061 SUPERFAMILY RNI-like 1608 1933 - -
Vivi215g00003 2061 SUPERFAMILY L domain-like 466 892 - -
Vivi215g00003 2061 SUPERFAMILY L domain-like 1243 1623 - -
Vivi215g00003 2061 SUPERFAMILY L domain-like 858 1253 - -
Vivi215g00003 2061 Gene3D Ribonuclease Inhibitor 1043 1229 IPR032675 -
Vivi215g00003 2061 Gene3D Ribonuclease Inhibitor 1737 1939 IPR032675 -
Vivi215g00003 2061 Gene3D - 309 397 IPR042197 -
Vivi215g00003 2061 Gene3D Ribonuclease Inhibitor 1326 1736 IPR032675 -
Vivi215g00003 2061 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 406 IPR027417 -
Vivi215g00003 2061 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1056 1211 - -
Vivi215g00003 2061 Coils Coil 36 60 - -
Vivi215g00003 2061 Pfam NB-ARC domain 159 394 IPR002182 GO:0043531
Vivi215g00003 2061 Coils Coil 1832 1852 - -
Vivi215g00003 2061 PRINTS Disease resistance protein signature 614 630 - -
Vivi215g00003 2061 PRINTS Disease resistance protein signature 343 357 - -
Vivi215g00003 2061 PRINTS Disease resistance protein signature 176 191 - -
Vivi215g00003 2061 PRINTS Disease resistance protein signature 249 263 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi215g00003 177 571 WRKY Transcription Factor Family AT5G45050 24.541 3.34e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi215g00003 - - psat:127092588 2621.27