Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi215g00001 ATGGAAATTGTAACTTCTGTTGTTGGAAAAGTAGCAGAGTTTACCGTTCTTCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGCCAATTTCAAAATGTTAGCTGATCATGTTAAAGATCTTGATGATGAAAGAGAAAGAATGACGCGTTTGGTTGAAGAAGAGGAGAGAAATGGTAAAACAATTTTTGAAGGTGTGGAGAGCTGGATTAAGAATGTGAAGGAGGTCACTGAAAGGGCGACTCAGCTTCAAAATGATCCACGTCATGCCAATGTTAGGTGCTCAGCAGCATGGCCGTTTCCTAATTTGATTTCGCGTCATCAACTAAGTAGGAAAGCCACAAAAATTGCAAAAGATGTTGTTCAAGTTCAAGGAAAAAAGATTTCTGATCCAGTTGGTTTCCTTCCTGCTTTAGATGGAGTCGCCTCTTCCTCCTCAACAAGAGGTGATGAAAAATATGAGACTAGGGAGTCACTCAAGCAGAAGATTATGAAGGCTTTAAAAGACCCTAATTCATGCAACATTGGGGTGTATGGGTTGGGTGGGGTGGGTAAGACCACTCTGGTGAAGGATGTTTTTCAAATAGCCAAGCAACAAAAATTGTTTGATGAAGTGGTTAAAACACATGTATCCAAAAATCCAGAATTGAAAACAATTCAAGGGGAGATTGCAGATATGTTGGGTCTGCGATTCCTTGAGGAGACTATTCAAGGCAGAGCTGATCGACTGAGACAGAGAATCAAGAAAGAGAAAAGTATCCTTATCATTCTAGATGATATATGGACCGTAATTGATTTGAAGGAAGTGGGAATTCCATTAATTGATGAGCATAATGGTTGCAAATTGTTGATGACAAGTAGAAATCAAGACGTGTTGGTGCAAATGGACGTTCCAGAGGATTTCGCTTTCAAACTTGAACTTATGAGTGAAAAAGAGACATGGAGCTTGTTTCAACTTATGGCTGGTGATGTGGTTAACAATAGGGATTTGAAAGATTTTGCAATTCAGGTTGCCCAAAAATGTGCAGGTTTGCCTCTTAGTATCACTACGGTAGCGCGTGCAATGAAAAATAAGAGGGATGTCCAATATTGGAAAGATGCATTAAGGAAATTACAATGTAATAATCACGAAGGGGTGCATGCGACAAGTTATTATGCTCTGGAGTTGAGTTACGACTCATTGGAAAGTGATGAAGTTAGGGATCTATTCTTGCTATATGCTTCAATTCCAAATCAAAATGTTGAGTATTATCTGAAAGTTGCAATGGGTTTGGACATATTAAATGATGTTAAAACCATTGATGATGCAAGAAACAAACATTACACAATAATCAAATCTTTGGAGGCGAGGTGTCTTTTGCTTGAAAGTAAAACAAGCGGATTGATCATAATGCATGACGTTGTTCGTGATTTTGCTACCTCCATAGCACGTAGAGATAAACATGTATTTTTAAGGAAATTTGCTGATGAGGAATGGCCAACCAATGATCTTTTAAACAGGTGCACCCAAATCATTCTACATAGGTGTCATCATATGGACGAGCTTCCACAAAGGATCGATTGTCCATGCATTAAATTTTTCTATTTGTGCAGTGAGAATCGATCTTTAGAAATCCCTCATACATTTTTTGAGGATATGAAAAGCCTTAAAATGCTAGATTTAACATCTTTGAACTTGCCTTCATTACCAACTTCGTTTCGGTTCCTAACGGACCTTAGATCGTTGTGTTTAGATTTCTGTGTTTTGGAAAATATGGATGCAATAGAAGCTTTGCAAAATTTAGAAATTCTCAGTCTCTGGAAATCTTCAATGATCATGTTACCAAGAGAAATAGGGAGATTGACTCAATTGAAAATGCTTGACTTGAGCAGCTCAGGAATAGAAGTAGTCCCACCCAACATCATATCAAGCTTGACTAAATTGGAGGAGTTGTACATGGGCAATACATCTAATATTAATTGGGCAGATGTGAATTCTACAGTTCAAAATGACAATGCTAGCATTTCCGAGCTTCGAAAACTACCCAACTTGACAGCTCTAGAATTACAAATTCGCGAGACTTGGATGTTGCCAAGGGACTTGCAACTGATGTTTGAGAAGCTGAAAAGATACAAAATAGCTATTGGAGATGTATGGGAATGGTCTGACATTGTGGTTGGAACCTTAAGAACATTGATGCTCAAACTTGGTACCTCGATACATTTGGAGCACGGAATTAAAGCATTGATTAAAAGTGTTGAGAATTTGTACATGGATGACGTGGATGGTATTCAAAATGTTCTTTATCAACTAAATGGGGAAGGATTCCCATATCTAAAACATCTCCACGTCCAAAATAATGCACACATGAACCACATAGTTGACTCTAAAGAGAGAAATCAAATCCATGTGTCCTTTCCCATCTTGGAAACTCTGGTACTTGATAATCTTAAAAACTTAGAGCATATATGTCATGGTCCACTTTCAGCTACTTCTTTTGGAAGTCTCAATGTTATCAAAGTCAAGAATTGCTTCCAGCTAAAATATCTTCTCTCCTTTACTTTGATTAAAGAACTTTCTCATCTTTCTAAGATCGAAGTTTGTCAGTGCAATTCTATGAAGGAGATAGTGTCCGCAGACAACAATTCAAGTGCAAATAATGAAAAAATTGAGTTTCTTCAATTGCATTCTTTGACTTTAGAACATTTGGAGACACTTGATAATTTCTTCTCTAATTATTTGACACACTCCACAACTATTCAAAAGTCTTTTTTCAATGCCCAGGTTGCATTTCCTAAATTGGATACCCTTAAATTGAGTTCTCTCAAGTTGAGTAAAATTTGGGATGATTATTCTATGTACAACTTGACTAGTTTGATTGTGGAGAATTGTGGCGGATTGAAGTACTTATTCTCTTCTACTGTTGTTGGAAGTTTTAAGAACCTCAAACACCTTGAAATAAGTAAGTGTCCTTTGATGGAGGAGGTAATAGCTAAAGAAGAGGGAAACAATCCGTTGGATGAGGTTCCTTTTTCCAAATTAGAGAAAATAATATTGAAGGACATGGTCAAATTGAAGACAATATGGCACCACCAGTTTGAGTCATTGAAGTCGTTGGAAGTGAACAATTGTGAGAAAATTGTGGTAGTTTTTCCTTCTTCAATTCAAACAACTTACAATAAGCTAGAGACTTTGGAGGTTACAAATTGTGCTTTTGTGGAAGAGATATTTGAGTTGACTTTCAACTGTGTAGAGGGTACATCTTATTTGAAAGAAGTTACTATAGATGGATTGCCGAAGCTGAAAAAGATATGGAGTAAGGATCCTCAAAGAATTCTTAGTTTTCAAAATCTAACAATTGTAAGATTACAGGGTTGTAAAAGTTTGGAGTATCTATTACCACTTTCTGTAGCTACTCGTTGTTCACATCTCAAAGAACTTGTGATAAAACAATGTAATTTCATGAATGAAATTGTTGCAGAGGAGAAAGAGTCAAGGCTGCGTGAAGCTCCCATATTTGAGTTTAACCAATTGAATACTCTAGTGCTTTGGAACTTGAACAAACTCAAATGTTTCTATGGTGGAAAACATACTCTATCATGTCCATCTTTGAGGAAAATCGATGTTTTCAAATGTTCAAAATTGAATTTGTATAGAACCCTTTCTACAAACAGCTCTAAAAGTAGTTTTCAACATGACAAGCTCTCCGTCATAACTCAACAACCACTTTTCATCGCCGAAGAGGTGATTCCAAACTTGGAGGAGTTGTGGATAGATCAAAAGGATGCTGAGATGATATTGCAAGCCCAAAACTCAAGTGCCCTTTTTACCAAACTGACCTTTCTTAGTTTAGAAAGGTATGAAAATGAAGAGGCTACATTTCCTTATTGGCTCCTTATTAATGTGCATAATCTTGAGCAGTTAGCTGTTCAGTGGAGTTGCTTCAAGAAAATATTTCAAGATGAAAGAGAAATAAGTGAGAAGACTCGTACACGGATTAAAAGGCTGTTTTTAAATGGATTACATAAACTTCAACATATATGTGAGGAAGGATCTAAAATTGACCCAATTCTTGAGTTCCTTGAACAATTACTGGTTTTTAGCTGTTCTAGTCTGACAAATTTGTTGCCTTCCTCTGTCACACTCAATCATTTGGTTCAGCTGGCGATAACATGTTGCAATGGGCTAAAAAAATTAATTACAACTCCTACGGCACAAAGTTTAGTCAAACTCACAATACTTGACGTAAGAGACTGTAAATCACTTGAAGAAATAATTATAGGAGTAGAAAATGTTAACGTTGCATTTATTAGTTTAAAAGTTCTGAGGTTGGAATGTTTGCCAAGCCTCAACAAATTTTGCTCTAGTAAGTGCTTCTTGAAGTTTCCATTGTTGGAGGTAGTAATTGTGAGAGAATGTCCTTACATGAAGATATTCTCAGAGGGAAACACAAGTACACCAAATCTTCGAAAAGTTAAAAATGCAGAAAATGAAGAGGAATGGCATTGGAAGGGAAACCTAAATGATACAATAAAAAAAATGTTTGAAGACAAGGTTGCATTTTCTAAATTCAAATATTTAGCCTTATCGGACCACCCTGTGCTAAAGGATTTATGGTATGGTCAAGTTGATCATCAGACTATATTTTGCAATATGAAACATCTAGTGGTGCAGAGATGTGATTTTTTATTAGATGTACTTTTTCCATCAAATGTTGTTCAAGTGCTATATTGTTTGGAAAAGCTAGAAGTAAAAGACTGTTATTCATTAGAAGCCATATTTGATGTTAAAGGTATGAAGTCTAATGAATCAACATTGATAAAACAAAGCTGTCAATTGAAAACCTTGACTTTGTCTTGCTTACCAAACTTAAAGCACATATGGAAAGAGGATCCTCATGAAATTATGAACTTTGGAAACATATGCTCAGTGGATGTTTCTTCATGCCAAAGCTTGTTATACATCTTTTCATTACCACTATGCCAAGATCTTGGAAATCTTGAAATGCTTAAGATAGATTCTTGTGGAGTCGAGGATATTGTTGCAATGAAAGAAGGATCAATGGAAATCACTTTTAATTTTCCACAACTAAATGCATTGGTACTTATTCGTTTGAAAAATCTAAAGAGTTTCTATCAAGGAAAACATACTTTAGAGTGCCCTTCATTGAAGAATTTGAATGTATATCTTTGTGAAACATTAAGAATGTTCTCCTTCAACAATTTAGATTTGCAACAACCTGATGAAAATTCTCAACAAGCCCTTTTTTCAATGGAAAAGCTGAGCACTAACTTGGAGTGTTTGTCAATAAATGCAAAGGATGCCTTTAAAATGTTGAATGATTACTCTCATCAAAATATCTTTCCTAAAATAGAAAGTCTTCACTTGCAACGCTTCAATGAAACTCCAACTATTCATCTGAATAATTTCCATGCGATATTTCCTAATCTAACAGCTCTTTCATTGTTTTATTGTTCTTTTGAAAAATTATTCCTTTCAAATGGAACTGCTGGAAATCTCAATAACAAACTTTCTAAACAAATAAAAGAGTTGGAGCTTTATGAACTAGAAAAGATCAAATACATCTGGCATGAAGATTTTCCTTTAGACAATTCTCTACTACAAGATCTTGAAAGTTTAAAAGTATGGAGTTGTCCAAGTTTGGTAAGTTTGGTACCATCGTCGTCATCTTTCACAAATCTAACCATTTTGGAGGTGAACAATTGCAAAGAGGTGATTTACTTGATAACATCTTCAACAGCTAAAAGCTTAGTTCAGCTCAGAGAATTAAAAATAAAGAAGTGTGAGAAGATGTTGGATGTTGTGAAGATTGATGATGAAAAAGTAGAGGAAGACATCATATTTGCAAAATTGGAAATCTTGAAGTTCATTACTTTGTTAAGCTTAAGAAACTTCTCCAATGGGAAACAAACATTCATATTCCCATCTTTGGCGCATTTCATTGTTAAAGGATGTCCTCAAATGAAGAATTTCTCATTAGGAGTCACGGAAGCACCATACCTGACAGGAATCGAAGTTGAAGACAAAAATATACAATGGAAAGGTGATCTTAACACAACTATTGAACAATTGTTCTTAGAAAAGGAAGCCTCACATTCTAATGGGACCATCATATCATCGTATTTGCAAGAGGATCAGAATACGATTTCCATTCTTTTAACCAAGCATGACCAATTGGACTCAGGGAAATGTCTTGTAAAGGGCGATAATGAAATTAATACCCAAAAAGTTGAACCTGAAAACAGCAAACTTGGTGACCTGCAGGATCCTGAGACTCGATCAACTGTCGAGAAAATGATGTTTGATCAGAGGTAG 6321 0.3575 MEIVTSVVGKVAEFTVLPIGRQASYLIFYKANFKMLADHVKDLDDERERMTRLVEEEERNGKTIFEGVESWIKNVKEVTERATQLQNDPRHANVRCSAAWPFPNLISRHQLSRKATKIAKDVVQVQGKKISDPVGFLPALDGVASSSSTRGDEKYETRESLKQKIMKALKDPNSCNIGVYGLGGVGKTTLVKDVFQIAKQQKLFDEVVKTHVSKNPELKTIQGEIADMLGLRFLEETIQGRADRLRQRIKKEKSILIILDDIWTVIDLKEVGIPLIDEHNGCKLLMTSRNQDVLVQMDVPEDFAFKLELMSEKETWSLFQLMAGDVVNNRDLKDFAIQVAQKCAGLPLSITTVARAMKNKRDVQYWKDALRKLQCNNHEGVHATSYYALELSYDSLESDEVRDLFLLYASIPNQNVEYYLKVAMGLDILNDVKTIDDARNKHYTIIKSLEARCLLLESKTSGLIIMHDVVRDFATSIARRDKHVFLRKFADEEWPTNDLLNRCTQIILHRCHHMDELPQRIDCPCIKFFYLCSENRSLEIPHTFFEDMKSLKMLDLTSLNLPSLPTSFRFLTDLRSLCLDFCVLENMDAIEALQNLEILSLWKSSMIMLPREIGRLTQLKMLDLSSSGIEVVPPNIISSLTKLEELYMGNTSNINWADVNSTVQNDNASISELRKLPNLTALELQIRETWMLPRDLQLMFEKLKRYKIAIGDVWEWSDIVVGTLRTLMLKLGTSIHLEHGIKALIKSVENLYMDDVDGIQNVLYQLNGEGFPYLKHLHVQNNAHMNHIVDSKERNQIHVSFPILETLVLDNLKNLEHICHGPLSATSFGSLNVIKVKNCFQLKYLLSFTLIKELSHLSKIEVCQCNSMKEIVSADNNSSANNEKIEFLQLHSLTLEHLETLDNFFSNYLTHSTTIQKSFFNAQVAFPKLDTLKLSSLKLSKIWDDYSMYNLTSLIVENCGGLKYLFSSTVVGSFKNLKHLEISKCPLMEEVIAKEEGNNPLDEVPFSKLEKIILKDMVKLKTIWHHQFESLKSLEVNNCEKIVVVFPSSIQTTYNKLETLEVTNCAFVEEIFELTFNCVEGTSYLKEVTIDGLPKLKKIWSKDPQRILSFQNLTIVRLQGCKSLEYLLPLSVATRCSHLKELVIKQCNFMNEIVAEEKESRLREAPIFEFNQLNTLVLWNLNKLKCFYGGKHTLSCPSLRKIDVFKCSKLNLYRTLSTNSSKSSFQHDKLSVITQQPLFIAEEVIPNLEELWIDQKDAEMILQAQNSSALFTKLTFLSLERYENEEATFPYWLLINVHNLEQLAVQWSCFKKIFQDEREISEKTRTRIKRLFLNGLHKLQHICEEGSKIDPILEFLEQLLVFSCSSLTNLLPSSVTLNHLVQLAITCCNGLKKLITTPTAQSLVKLTILDVRDCKSLEEIIIGVENVNVAFISLKVLRLECLPSLNKFCSSKCFLKFPLLEVVIVRECPYMKIFSEGNTSTPNLRKVKNAENEEEWHWKGNLNDTIKKMFEDKVAFSKFKYLALSDHPVLKDLWYGQVDHQTIFCNMKHLVVQRCDFLLDVLFPSNVVQVLYCLEKLEVKDCYSLEAIFDVKGMKSNESTLIKQSCQLKTLTLSCLPNLKHIWKEDPHEIMNFGNICSVDVSSCQSLLYIFSLPLCQDLGNLEMLKIDSCGVEDIVAMKEGSMEITFNFPQLNALVLIRLKNLKSFYQGKHTLECPSLKNLNVYLCETLRMFSFNNLDLQQPDENSQQALFSMEKLSTNLECLSINAKDAFKMLNDYSHQNIFPKIESLHLQRFNETPTIHLNNFHAIFPNLTALSLFYCSFEKLFLSNGTAGNLNNKLSKQIKELELYELEKIKYIWHEDFPLDNSLLQDLESLKVWSCPSLVSLVPSSSSFTNLTILEVNNCKEVIYLITSSTAKSLVQLRELKIKKCEKMLDVVKIDDEKVEEDIIFAKLEILKFITLLSLRNFSNGKQTFIFPSLAHFIVKGCPQMKNFSLGVTEAPYLTGIEVEDKNIQWKGDLNTTIEQLFLEKEASHSNGTIISSYLQEDQNTISILLTKHDQLDSGKCLVKGDNEINTQKVEPENSKLGDLQDPETRSTVEKMMFDQR 2106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi215g00001 2106 MobiDBLite consensus disorder prediction 2080 2106 - -
Vivi215g00001 2106 Gene3D - 143 302 IPR027417 -
Vivi215g00001 2106 FunFam Probable disease resistance protein At1g61300 143 302 - -
Vivi215g00001 2106 SUPERFAMILY RNI-like 909 1154 - -
Vivi215g00001 2106 Gene3D - 2004 2102 IPR008978 -
Vivi215g00001 2106 Coils Coil 68 88 - -
Vivi215g00001 2106 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1056 1211 - -
Vivi215g00001 2106 MobiDBLite consensus disorder prediction 2084 2106 - -
Vivi215g00001 2106 Pfam NB-ARC domain 159 394 IPR002182 GO:0043531
Vivi215g00001 2106 Gene3D Ribonuclease Inhibitor 501 1000 IPR032675 -
Vivi215g00001 2106 SUPERFAMILY L domain-like 466 896 - -
Vivi215g00001 2106 PRINTS Disease resistance protein signature 614 630 - -
Vivi215g00001 2106 PRINTS Disease resistance protein signature 343 357 - -
Vivi215g00001 2106 PRINTS Disease resistance protein signature 176 191 - -
Vivi215g00001 2106 PRINTS Disease resistance protein signature 249 263 - -
Vivi215g00001 2106 SUPERFAMILY L domain-like 1243 1623 - -
Vivi215g00001 2106 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 406 IPR027417 -
Vivi215g00001 2106 Gene3D Ribonuclease Inhibitor 1044 1236 IPR032675 -
Vivi215g00001 2106 Gene3D Ribonuclease Inhibitor 1736 1939 IPR032675 -
Vivi215g00001 2106 Gene3D Ribonuclease Inhibitor 1326 1735 IPR032675 -
Vivi215g00001 2106 Coils Coil 36 60 - -
Vivi215g00001 2106 Gene3D - 309 397 IPR042197 -
Vivi215g00001 2106 Coils Coil 1832 1852 - -
Vivi215g00001 2106 SUPERFAMILY RNI-like 1756 1993 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi215g00001 177 571 WRKY Transcription Factor Family AT5G45050 24.541 3.48e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi215g00001 - - psat:127092588 2621.27