Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi214g00030 ATGGGAATAAGAGATTTTCGTATCAAAATCAAGGCTTTGAGAGTGAAACTATCATGCTTAGGAAAAAGAAGAACAAGAAGAAACCATGAAGCTTCAAGCAAACCTTCATGGATGACGCCGATATCGCACGGTCATCATGTGGTGGAGCATGATTTATTTGAAGGTGATGATTATGAATTTGATTCAGTTGTGATACAGAGAGAGCAAATTGGAGAGGCTGAAGTCTGGTATTTTGGAATTTTTGATCCTTTGATTGGAGATTGTGTTACCAAGTATTTGCAATCTAATTATTTTGACAAGAAGCTCAATGAGACTCATTTGGCAAGAAAAGCCAAAGAAACACTCAAGAAAGCATACCTAGGTGCAAAAACAAAGATAAGAGAAACACACAAATCAGAGGAAACTTGCTTAATAGGTTCAACATCAGTGATAATAATAAATGGAGAAAAACTTGTACTAGCCAACATAGGAGATTACAGAACTGTTTTGTGCAAAGATGGTGTAGCTTATCAGACACATGGAAGATACAATCAATCCGGCAAGAAACATTGGTATCACAGGCTCTTTTCAGGTGGTAATGCAACTGCTACAAAGTATTCTAAAGCTTCAGAACTAGTGGTTGGAGGTTACTACCGGATCGACTCGTACATTGAGTTTGTTATTTTAGCAAGCAATGGAATATGGGAGGTGATGAAGAACCAAGAGGCGGTGAATCTTATCAGGCACATAGAGGATCCACAGGAAGCAGCTGAGTGTCTGGCTAAGGAAGCATTGGTTAGGAGGAGCAAGGGCAACATTTCATGTTTAATCATTCGATTTGATTGA 825 0.3867 MGIRDFRIKIKALRVKLSCLGKRRTRRNHEASSKPSWMTPISHGHHVVEHDLFEGDDYEFDSVVIQREQIGEAEVWYFGIFDPLIGDCVTKYLQSNYFDKKLNETHLARKAKETLKKAYLGAKTKIRETHKSEETCLIGSTSVIIINGEKLVLANIGDYRTVLCKDGVAYQTHGRYNQSGKKHWYHRLFSGGNATATKYSKASELVVGGYYRIDSYIEFVILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALVRRSKGNISCLIIRFD 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi214g00030 274 SMART PP2C_4 35 271 IPR001932 -
Vivi214g00030 274 ProSiteProfiles PPM-type phosphatase domain profile. 57 273 IPR001932 -
Vivi214g00030 274 Gene3D - 47 185 IPR036457 -
Vivi214g00030 274 Gene3D - 194 274 IPR036457 -
Vivi214g00030 274 PANTHER PROTEIN PHOSPHATASE 43 272 IPR015655 GO:0004722|GO:0006470
Vivi214g00030 274 Pfam Protein phosphatase 2C 217 266 IPR001932 -
Vivi214g00030 274 Pfam Protein phosphatase 2C 72 170 IPR001932 -
Vivi214g00030 274 CDD PP2Cc 61 273 IPR001932 -
Vivi214g00030 274 SUPERFAMILY PP2C-like 67 274 IPR036457 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi214g00030 1 273 PP2C-type Phosphatase Gene Family AT3G23360 44.086 2.79e-71 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi214g00030 K19704 - gmx:100794054 389.423