Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi214g00026 ATGCATGTTTTGACAGTGATGGGGAAGACAAGCAAATGGTTTAGGAATCTTTTGAAAGGGAAGAAAGACAAAGACAAAGAAAAAGAGAAGGAAGATTGTGGAAATGGAACAGAAAATCCAACTACTCCAATCTCAGCAACACCGAAGGAGAAAAGAAGATGGAGTTTCAGAAGATTGTCAGCTTCTAAGGAAGTTCATGTTGCAGAATCTAGTGTCGCTTCTTCGGTGACATTACAAACTGTCACAGATTCTCAGAATTATCAGAGGAAGCATGTCATGGATGTTGCTGCTGCAGATGGTGTGATCTTCTTGAATTCTTGTTTCAATGGAGGAACTACAAGGAGTATTGAAGTGGCTGCTGCTATTAAAATTCAATCTGTCTTTAGATCCTACTTGGCAAGAAAGGCATTGTGTGCTCTTAGAGGAATAGTGATGCTGCAAGCACTAGTAAGAGGTCACTTAGTGAGAAAACAAGCAACTGAAACACTGAGATGCATGCAAGCTTTGGTCTTAGCACAAGCAAGAGCTTGTGCTCAAAGGGCTAGAATGTTATCAGAAGAAAAGGCTAATCAAAAGCATGCAACCTACAGAAAAGCCACAGAGGGCAGCTTATTCATGCATATGTTTAATGAAATAGAAAGAGGCTTAGAAGAGAATATAAAGACAGTGGAGATGGATGTTTGTGAATCTAAAGGCAACTCAAGAGGCAGAAACAACACTACAAATCATGAACACCATGGATTCTCTGAACACAGACTTTCAGCATATTATTCACCAAATGGTTCATACTCAAAGAAAGAAAACTACAAAGTATCACCTACACCATCCGCACGAACCGACTCAAGTCCAAAAGCATGCAGTGGATATTTGGAGGACGGTTCCTTCACTACAGCACAGAACAGTCCCTATTACTACTCAGCAGTTTCAAGAGCAGATGATTCAAAGCTTCCTTTTTCTTTCACTAGACAACCCTATGAAGAATCCATGGCCAATGAATATCCATTATTTCCAAACTACATGGCTAACACAGAATCATCAAGAGCTAAAGTAAGATCGCAGAGTGCACCGAAGCAAAGACCGGACTCATATGAAAGGCAACCGAGTCGGCGAAGAGCTTCTGTGGAAGGAAGAAATGTTCCAAGACCTGTGAGGATGTTGAGATCATCTTCACATGTTGGGGCCACTGCACAAAATTATCAATATCCATGGTCAGTAAAGCTTGATAGGACCTCAGCTTCACTCAATGACAATGACTGTGGCTCTACAAGTACAGTACTAACAAACTCTAACTATTGCAGATCTCTTGTTTCATATAATCCTCATGGACCCAAGTGA 1335 0.4082 MHVLTVMGKTSKWFRNLLKGKKDKDKEKEKEDCGNGTENPTTPISATPKEKRRWSFRRLSASKEVHVAESSVASSVTLQTVTDSQNYQRKHVMDVAAADGVIFLNSCFNGGTTRSIEVAAAIKIQSVFRSYLARKALCALRGIVMLQALVRGHLVRKQATETLRCMQALVLAQARACAQRARMLSEEKANQKHATYRKATEGSLFMHMFNEIERGLEENIKTVEMDVCESKGNSRGRNNTTNHEHHGFSEHRLSAYYSPNGSYSKKENYKVSPTPSARTDSSPKACSGYLEDGSFTTAQNSPYYYSAVSRADDSKLPFSFTRQPYEESMANEYPLFPNYMANTESSRAKVRSQSAPKQRPDSYERQPSRRRASVEGRNVPRPVRMLRSSSHVGATAQNYQYPWSVKLDRTSASLNDNDCGSTSTVLTNSNYCRSLVSYNPHGPK 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi214g00026 444 MobiDBLite consensus disorder prediction 344 361 - -
Vivi214g00026 444 MobiDBLite consensus disorder prediction 18 35 - -
Vivi214g00026 444 MobiDBLite consensus disorder prediction 265 283 - -
Vivi214g00026 444 PANTHER IQ-DOMAIN 5-RELATED 7 375 - -
Vivi214g00026 444 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Vivi214g00026 444 MobiDBLite consensus disorder prediction 362 377 - -
Vivi214g00026 444 Pfam Protein of unknown function (DUF4005) 324 376 IPR025064 -
Vivi214g00026 444 SMART iq_5 139 160 IPR000048 GO:0005515
Vivi214g00026 444 SMART iq_5 116 138 IPR000048 GO:0005515
Vivi214g00026 444 ProSiteProfiles IQ motif profile. 117 141 IPR000048 GO:0005515
Vivi214g00026 444 Pfam IQ calmodulin-binding motif 119 137 IPR000048 GO:0005515
Vivi214g00026 444 Pfam IQ calmodulin-binding motif 141 158 IPR000048 GO:0005515
Vivi214g00026 444 MobiDBLite consensus disorder prediction 231 252 - -
Vivi214g00026 444 MobiDBLite consensus disorder prediction 18 50 - -
Vivi214g00026 444 MobiDBLite consensus disorder prediction 265 285 - -
Vivi214g00026 444 Gene3D - 117 170 - -
Vivi214g00026 444 MobiDBLite consensus disorder prediction 344 391 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi214g00026 6 435 IQD Protein Family AT4G14750 42.826 6.15e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi214g00026 - - gmx:100817667 527.709