Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi214g00025 | ATGGGGAAGACAAGCAAATGGTTTAGGAATCTTTTGAAAGGGAAGAAAGACAAAGACAAAGAAAAAGAGAAGGAAGATTGTGGAAATGGAACAGAAAATCCAACTACTCCAATCTCAGCAACACCGAAGGAGAAAAGAAGATGGAGTTTCAGAAGATTGTCAGCTTCTAAGGAAGTTCATGTTGCAGAATCTAGTGTCGCTTCTTCGGTGACATTACAAACTGTCACAGATTCTCAGAATTATCAGAGGAAGCATGTCATGGATGTTGCTGCTGCAGATGGTGTGATCTTCTTGAATTCTTGTTTCAATGGAGGAACTACAAGGAGTATTGAAGTGGCTGCTGCTATTAAAATTCAATCTGTCTTTAGATCCTACTTGGCAAGAAAGGCATTGTGTGCTCTTAGAGGAATAGTGATGCTGCAAGCACTAGTAAGAGGTCACTTAGTGAGAAAACAAGCAACTGAAACACTGAGATGCATGCAAGCTTTGGTCTTAGCACAAGCAAGAGCTTGTGCTCAAAGGGCTAGAATGTTATCAGAAGAAAAGGCTAATCAAAAGCATGCAACCTACAGAAAAGCCACAGAGGGCAGCTTATTCATGCATATGTTTAATGAAATAGAAAGAGGCTTAGAAGAGAATATAAAGACAGTGGAGATGGATGTTTGTGAATCTAAAGGCAACTCAAGAGGCAGAAACAACACTACAAATCATGAACACCATGGATTCTCTGAACACAGACTTTCAGCATATTATTCACCAAATGGTTCATACTCAAAGAAAGAAAACTACAAAGTATCACCTACACCATCCGCACGAACCGACTCAAGTCCAAAAGCATGCAGTGGATATTTGGAGGACGGTTCCTTCACTACAGCACAGAACAGTCCCTATTACTACTCAGCAGTTTCAAGAGCAGATGATTCAAAGCTTCCTTTTTCTTTCACTAGACAACCCTATGAAGAATCCATGGCCAATGAATATCCATTATTTCCAAACTACATGGCTAACACAGAATCATCAAGAGCTAAAGTAAGATCGCAGAGTGCACCGAAGCAAAGACCGGACTCATATGAAAGGCAACCGAGTCGGCGAAGAGCTTCTGTGGAAGGAAGAAATGTTCCAAGACCTGTGAGGATGTTGAGATCATCTTCACATGTTGGGGCCACTGCACAAAATTATCAATATCCATGGTCAGTAAAGCTTGATAGGACCTCAGCTTCACTCAATGACAATGACTGTGGCTCTACAAGTACAGTACTAACAAACTCTAACTATTGCAGATCTCTTGTTTCATATAATCCTCATGGACCCAAGTGA | 1317 | 0.4085 | MGKTSKWFRNLLKGKKDKDKEKEKEDCGNGTENPTTPISATPKEKRRWSFRRLSASKEVHVAESSVASSVTLQTVTDSQNYQRKHVMDVAAADGVIFLNSCFNGGTTRSIEVAAAIKIQSVFRSYLARKALCALRGIVMLQALVRGHLVRKQATETLRCMQALVLAQARACAQRARMLSEEKANQKHATYRKATEGSLFMHMFNEIERGLEENIKTVEMDVCESKGNSRGRNNTTNHEHHGFSEHRLSAYYSPNGSYSKKENYKVSPTPSARTDSSPKACSGYLEDGSFTTAQNSPYYYSAVSRADDSKLPFSFTRQPYEESMANEYPLFPNYMANTESSRAKVRSQSAPKQRPDSYERQPSRRRASVEGRNVPRPVRMLRSSSHVGATAQNYQYPWSVKLDRTSASLNDNDCGSTSTVLTNSNYCRSLVSYNPHGPK | 438 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi214g00025 | 438 | Pfam | Protein of unknown function (DUF4005) | 318 | 370 | IPR025064 | - | |
| Vivi214g00025 | 438 | MobiDBLite | consensus disorder prediction | 225 | 246 | - | - | |
| Vivi214g00025 | 438 | MobiDBLite | consensus disorder prediction | 10 | 29 | - | - | |
| Vivi214g00025 | 438 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
| Vivi214g00025 | 438 | ProSiteProfiles | IQ motif profile. | 135 | 162 | IPR000048 | GO:0005515 | |
| Vivi214g00025 | 438 | MobiDBLite | consensus disorder prediction | 259 | 279 | - | - | |
| Vivi214g00025 | 438 | MobiDBLite | consensus disorder prediction | 338 | 385 | - | - | |
| Vivi214g00025 | 438 | ProSiteProfiles | IQ motif profile. | 111 | 135 | IPR000048 | GO:0005515 | |
| Vivi214g00025 | 438 | MobiDBLite | consensus disorder prediction | 259 | 277 | - | - | |
| Vivi214g00025 | 438 | MobiDBLite | consensus disorder prediction | 338 | 355 | - | - | |
| Vivi214g00025 | 438 | Pfam | IQ calmodulin-binding motif | 135 | 152 | IPR000048 | GO:0005515 | |
| Vivi214g00025 | 438 | Pfam | IQ calmodulin-binding motif | 113 | 131 | IPR000048 | GO:0005515 | |
| Vivi214g00025 | 438 | SMART | iq_5 | 133 | 154 | IPR000048 | GO:0005515 | |
| Vivi214g00025 | 438 | SMART | iq_5 | 110 | 132 | IPR000048 | GO:0005515 | |
| Vivi214g00025 | 438 | MobiDBLite | consensus disorder prediction | 356 | 371 | - | - | |
| Vivi214g00025 | 438 | Gene3D | - | 111 | 165 | - | - | |
| Vivi214g00025 | 438 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 369 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vivi214g00025 | 1 | 429 | IQD Protein Family | AT4G14750 | 42.920 | 2.34e-88 | 275 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi214g00025 | - | - | gmx:100817667 | 527.709 |