Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi214g00001 ATGGCTCGTCCGATGGAAAAAATTGTTGACATCAACGACACCAAGGAGTTGTGGAAAGTGGCGGTGAGAGTTGCTCATAAGTGGAAGGTTGTATCGAACAACAAAGAGCACTTTGAGATGATCTTCCAAGACAGAGAGGGCTGTGATATACACGTTGTTGTTCCAACTGCATGCATGGCCGCGTACAATGAGAAGTTTGAGGTGGACCGCACCTATACTGTCTCAAATTTTGCGGTTCAGTCTAATAACTTACTTTTCAAACCAAGCTCCCACAAGTTCTTGGTGAAGCTTACTGGAGGAACTGCGGTTGGTGATGTTGACAAACATGACATACCCCTCAAACCACGCCCCTTCACCAGTTTCCCTGACATCATTAACGGAAACTTTCAGAAGAATGTACTCATTGATGTTATTGGTATGCTCGAGAGTGTTGGGTATCAACAGACGCAAAGTGGCGGAAAAAAATGTCAGGCTAATTTTCTACTGAGGGATGCAAGCAACAACACCATTAATTGCACCCTCTGGGAAGACTATGCCAAACAGTTTTTTAAGTTTACCGAGGACAAATCTGCTACAAGTGGGCCTATTATTGTTTTGATTCAGTTTGCAAAAGTTAAAGAAGCTGGCCACTACCCTCTCTCCGTTACCAACACATTCCATGTTACCAAGCTCCTTATCAATTCAGATCTCCCTGTTGTCAAGGAATTCCTTAACAGTTTCCCAAAGGAATCCTTACGTGTTGTTTCCACACAGCTAACCTCTCAGTCTCAACAATACTCCCGCACATCGACAAATGATAACGGTGGACAATGTCATATGCAGAAGTTGCTGAAAGGTGCTATTTCAGTTCCACAGACGCATGATACTTTCTACTTACATGCCCGGTAG 888 0.4369 MARPMEKIVDINDTKELWKVAVRVAHKWKVVSNNKEHFEMIFQDREGCDIHVVVPTACMAAYNEKFEVDRTYTVSNFAVQSNNLLFKPSSHKFLVKLTGGTAVGDVDKHDIPLKPRPFTSFPDIINGNFQKNVLIDVIGMLESVGYQQTQSGGKKCQANFLLRDASNNTINCTLWEDYAKQFFKFTEDKSATSGPIIVLIQFAKVKEAGHYPLSVTNTFHVTKLLINSDLPVVKEFLNSFPKESLRVVSTQLTSQSQQYSRTSTNDNGGQCHMQKLLKGAISVPQTHDTFYLHAR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi214g00001 295 CDD RPA1_DBD_B_like 136 241 - -
Vivi214g00001 295 Gene3D - 109 249 IPR012340 -
Vivi214g00001 295 CDD RPA1_DBD_A_like 19 103 - -
Vivi214g00001 295 Pfam Replication protein A OB domain 128 218 IPR031657 -
Vivi214g00001 295 SUPERFAMILY Nucleic acid-binding proteins 6 103 IPR012340 -
Vivi214g00001 295 Gene3D - 3 104 IPR012340 -
Vivi214g00001 295 SUPERFAMILY Nucleic acid-binding proteins 117 243 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi214g00001 1 266 Core DNA Replication Machinery Family AT5G08020 22.695 1.85e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi214g00001 - - vvo:131639369 479.559