Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi212g00043 ATGGCAGACTCGAGTTCCAATGCCACCAACGCAGGCTCTCATTTCCTACCAACGGTTACATTATTCGACTGGTGGCTCGTTAAATCCCCAGATAACCGTTTATGCATCTCCGGCAACGCTTCCAGAAAGGGAGAAGCCGTTCGCGTGTTTAATTCTTCTCCTATTGTCGAAAGATACGATGTGTATTCCCTTAAGAATGCCGAGGGTATATACATTTTCATTAGGGGTATCATCAATGAGGAACGCACCCGCGAAAAAGATGAGGAAGAATCAATTTCTGTTTTGTCGAAATTGCCTGAAGAAGCCCCAAAAAATAACCAGACACCATTCCCTGGAGATGAATGCCAAGTCTCAAAGGAGACGAGTGGGGTAAATGTTGCTTGTGGTGGTGGTGTAATTAGACGTAGTACCAGGTTGCATAGTATTAACGTCTGTCAGCAGAAGAAGATAGAGAAGCAGCAGCCTACGTATAGAGGTCCTCTCAAGCATCCACATGAAGAGCCAAGCTCTACCTCCAAGGTAGTGGAGAATCGTGATTCGGATACTGTGCATCTTGATAATGTATCAGCAAATTTTCCAGAAATATCATCTCGTGCAGTGGAAAATTCTTTTCCTACTTCTTTGGTAACACCAGAAAAGGCCATGGGACATTGCAATAAGTTATTCCCTGAAGGTGAAGAAGATATGTCAATTAAGACGAACGAGGCCAATGTTGTTCATGGTAGTGGCGGGCATAGACGTAGTGCCCGACTGCATAATGTTAAATCCTTCCAGAAGAAGCAACCTGCTACTGGAGGTCCAGCAACACGTCGAGGTAAAGACCAGATCTCTGCCTCAGCAACCATAGAAAAGAGTGATGGAGGGCTGGAAAATCTATCGACACCCGTTCAGTCACAAAGTGGAATAGTAAACACGCCGTCTGGGAAGGTCACTAATAAATTCAGATCCAAAACTTCTTCAGCAAAAACTGATGCTTCAGCAAAAACTGAAGTGGATCATAAGAAAAAGAAGGTGACAGTTGAAACAGAAGCGGTGAATCCCAAGAGAAAAGATTTGAAACCCCCATCTTCTGTAAAATCTCCACAGGGAAGGGATGTAAGTCACTTGAACAAGGGAAGTAAACAGGGACTGTCCATGGTTTCTCCAGAGTCATTGAGTCTTAAAAAATCCAGATCTGGTAGGTTACTTCTACCTTCCATGGAGTTTTGGCGCAATGAAATACCCATTTATAATGCGGACCGTGGGATTAAAGAAATTCAGCAAGACTCGACTTTGACATCACCTTTTAGATGCTTTTCGCCATTACCTTTTAGAGGCTTTTCGCCATCACCGGGCAGGTTTTGA 1344 0.439 MADSSSNATNAGSHFLPTVTLFDWWLVKSPDNRLCISGNASRKGEAVRVFNSSPIVERYDVYSLKNAEGIYIFIRGIINEERTREKDEEESISVLSKLPEEAPKNNQTPFPGDECQVSKETSGVNVACGGGVIRRSTRLHSINVCQQKKIEKQQPTYRGPLKHPHEEPSSTSKVVENRDSDTVHLDNVSANFPEISSRAVENSFPTSLVTPEKAMGHCNKLFPEGEEDMSIKTNEANVVHGSGGHRRSARLHNVKSFQKKQPATGGPATRRGKDQISASATIEKSDGGLENLSTPVQSQSGIVNTPSGKVTNKFRSKTSSAKTDASAKTEVDHKKKKVTVETEAVNPKRKDLKPPSSVKSPQGRDVSHLNKGSKQGLSMVSPESLSLKKSRSGRLLLPSMEFWRNEIPIYNADRGIKEIQQDSTLTSPFRCFSPLPFRGFSPSPGRF 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi212g00043 447 Pfam SANTA (SANT Associated) 19 91 IPR015216 -
Vivi212g00043 447 MobiDBLite consensus disorder prediction 360 388 - -
Vivi212g00043 447 MobiDBLite consensus disorder prediction 144 176 - -
Vivi212g00043 447 MobiDBLite consensus disorder prediction 274 325 - -
Vivi212g00043 447 MobiDBLite consensus disorder prediction 326 355 - -
Vivi212g00043 447 MobiDBLite consensus disorder prediction 240 391 - -
Vivi212g00043 447 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 6 85 - -
Vivi212g00043 447 MobiDBLite consensus disorder prediction 155 176 - -
Vivi212g00043 447 MobiDBLite consensus disorder prediction 84 114 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi212g00043 SANTA 4.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi212g00043 - - vvo:131626610 705.671