Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi212g00042 ATGGCAGACTCGAGTTCCAATGCCACCAACGCAGGCTCTCATTTCCTACCAACGGTTACATTATTCGACTGGTGGCTCGTTAAATCCCCAGATAACCGTTTATGCATCTCCGGCAACGCTTCCAGAAAGGGAGAAGCCGTTCGCGTGTTTAATTCTTCTCCTATTGTCGAAAGATACGATGTGTATTCCCTTAAGAATGCCGAGGGTATATACATTTTCATTAGGGGTATCATCAATGAGGAACGCACCCGCGAAAAAGTGCTACCTTCTTTTCTACTTTATGCTCAGATTTTCAATAGTTTTTACATTGGCTTTCCTCCAAACTGGGAAACTTGTTGGGTTTTACATTGTATCAGAGAAGAACAAGTAGAACCTGGTACTGATTCAGTCAATGCTGCTATGGATAATGTATCTCCAATTTGTCAAGACATTTTGTCTGACGATGAGGAAGAATCAATTTCTGTTTTGTCGAAATTGCCTGAAGAAGCCCCAAAAAATAACCAGACACCATTCCCTGGAGATGAATGCCAAGTCTCAAAGGAGACGAGTGGGGTAAATGTTGCTTGTGGTGGTGGTGTAATTAGACGTAGTACCAGGTTGCATAGTATTAACGTCTGTCAGCAGAAGAAGATAGAGAAGCAGCAGCCTACGTATAGAGGTCCTCTCAAGCATCCACATGAAGAGCCAAGCTCTACCTCCAAGGTAGTGGAGAATCGTGATTCGGATACTGTGCATCTTGATAATGTATCAGCAAATTTTCCAGAAATATCATCTCGTGCAGTGGAAAATTCTTTTCCTACTTCTTTGGTAACACCAGAAAAGGCCATGGGACATTGCAATAAGTTATTCCCTGAAGGTGAAGAAGATATGTCAATTAAGACGAACGAGGCCAATGTTGTTCATGGTAGTGGCGGGCATAGACGTAGTGCCCGACTGCATAATGTTAAATCCTTCCAGAAGAAGCAACCTGCTACTGGAGGTCCAGCAACACGTCGAGGTAAAGACCAGATCTCTGCCTCAGCAACCATAGAAAAGAGTGATGGAGGGCTGGAAAATCTATCGACACCCGTTCAGTCACAAAGTGGAATAGTAAACACGCCGTCTGGGAAGGTCACTAATAAATTCAGATCCAAAACTTCTTCAGCAAAAACTGATGCTTCAGCAAAAACTGAAGTGGATCATAAGAAAAAGAAGGTGACAGTTGAAACAGAAGCGGTGAATCCCAAGAGAAAAGATTTGAAACCCCCATCTTCTGTAAAATCTCCACAGGGAAGGGATGTAAGTCACTTGAACAAGGGAAGTAAACAGGGACTGTCCATGGTTTCTCCAGAGTCATTGAGTCTTAAAAAATCCAGATCTGGTAGGTTACTTCTACCTTCCATGGAGTTTTGGCGCAATGAAATACCCATTTATAATGCGGACCGTGGGATTAAAGAAATTCAGCAAGACTCGACTTTGACATCACCTTTTAGATGCTTTTCGCCATTACCTTTTAGAGGCTTTTCGCCATCACCGGGCAGGTTTTGA 1527 0.4303 MADSSSNATNAGSHFLPTVTLFDWWLVKSPDNRLCISGNASRKGEAVRVFNSSPIVERYDVYSLKNAEGIYIFIRGIINEERTREKVLPSFLLYAQIFNSFYIGFPPNWETCWVLHCIREEQVEPGTDSVNAAMDNVSPICQDILSDDEEESISVLSKLPEEAPKNNQTPFPGDECQVSKETSGVNVACGGGVIRRSTRLHSINVCQQKKIEKQQPTYRGPLKHPHEEPSSTSKVVENRDSDTVHLDNVSANFPEISSRAVENSFPTSLVTPEKAMGHCNKLFPEGEEDMSIKTNEANVVHGSGGHRRSARLHNVKSFQKKQPATGGPATRRGKDQISASATIEKSDGGLENLSTPVQSQSGIVNTPSGKVTNKFRSKTSSAKTDASAKTEVDHKKKKVTVETEAVNPKRKDLKPPSSVKSPQGRDVSHLNKGSKQGLSMVSPESLSLKKSRSGRLLLPSMEFWRNEIPIYNADRGIKEIQQDSTLTSPFRCFSPLPFRGFSPSPGRF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi212g00042 508 MobiDBLite consensus disorder prediction 335 386 - -
Vivi212g00042 508 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 6 482 - -
Vivi212g00042 508 MobiDBLite consensus disorder prediction 216 237 - -
Vivi212g00042 508 MobiDBLite consensus disorder prediction 211 237 - -
Vivi212g00042 508 Pfam SANTA (SANT Associated) 19 111 IPR015216 -
Vivi212g00042 508 MobiDBLite consensus disorder prediction 301 452 - -
Vivi212g00042 508 MobiDBLite consensus disorder prediction 387 416 - -
Vivi212g00042 508 MobiDBLite consensus disorder prediction 421 449 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi212g00042 SANTA 1.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi212g00042 - - vvo:131626610 1007.67