Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi212g00041 ATGCCACCAACGCAGGCTCTCATTTCCGGCAACGCTTCCAGAAAGGGAGAAGCCGTTCGCGTGTTTAATTCTTCTCCTATTGTCGAAAGATACGATGTGTATTCCCTTAAGAATGCCGAGGGTATATACATTTTCATTAGGGGTATCATCAATGAGGAACGCACCCGCGAAAAAGTGCTACCTTCTTTTCTACTTTATGCTCAGATTTTCAATAGTTTTTACATTGGCTTTCCTCCAAACTGGGAAACTTGTTGGGTTTTACATTGTATCAGAGAAGAACAAGTAGAACCTGGTACTGATTCAGTCAATGCTGCTATGGATAATGTATCTCCAATTTGTCAAGACATTTTGTCTGACGATGAGGAAGAATCAATTTCTGTTTTGTCGAAATTGCCTGAAGAAGCCCCAAAAAATAACCAGACACCATTCCCTGGAGATGAATGCCAAGTCTCAAAGGAGACGAGTGGGGTAAATGTTGCTTGTGGTGGTGGTGTAATTAGACGTAGTACCAGGTTGCATAGTATTAACGTCTGTCAGCAGAAGAAGATAGAGAAGCAGCAGCCTACGTATAGAGGTCCTCTCAAGCATCCACATGAAGAGCCAAGCTCTACCTCCAAGGTAGTGGAGAATCGTGATTCGGATACTGTGCATCTTGATAATGTATCAGCAAATTTTCCAGAAATATCATCTCGTGCAGTGGAAAATTCTTTTCCTACTTCTTTGGTAACACCAGAAAAGGCCATGGGACATTGCAATAAGTTATTCCCTGAAGGTGAAGAAGATATGTCAATTAAGACGAACGAGGCCAATGTTGTTCATGGTAGTGGCGGGCATAGACGTAGTGCCCGACTGCATAATGTTAAATCCTTCCAGAAGAAGCAACCTGCTACTGGAGGTCCAGCAACACGTCGAGGTAAAGACCAGATCTCTGCCTCAGCAACCATAGAAAAGAGTGATGGAGGGCTGGAAAATCTATCGACACCCGTTCAGTCACAAAGTGGAATAGTAAACACGCCGTCTGGGAAGGTCACTAATAAATTCAGATCCAAAACTTCTTCAGCAAAAACTGATGCTTCAGCAAAAACTGAAGTGGATCATAAGAAAAAGAAGGTGACAGTTGAAACAGAAGCGGTGAATCCCAAGAGAAAAGATTTGAAACCCCCATCTTCTGTAAAATCTCCACAGGGAAGGGATGTAAGTCACTTGAACAAGGGAAGTAAACAGGGACTGTCCATGGTTTCTCCAGAGTCATTGAGTCTTAAAAAATCCAGATCTGGTAGGTTACTTCTACCTTCCATGGAGTTTTGGCGCAATGAAATACCCATTTATAATGCGGACCGTGGGATTAAAGAAATTCAGCAAGACTCGACTTTGACATCACCTTTTAGATGCTTTTCGCCATTACCTTTTAGAGGCTTTTCGCCATCACCGGGCAGGTTTTGA 1443 0.4283 MPPTQALISGNASRKGEAVRVFNSSPIVERYDVYSLKNAEGIYIFIRGIINEERTREKVLPSFLLYAQIFNSFYIGFPPNWETCWVLHCIREEQVEPGTDSVNAAMDNVSPICQDILSDDEEESISVLSKLPEEAPKNNQTPFPGDECQVSKETSGVNVACGGGVIRRSTRLHSINVCQQKKIEKQQPTYRGPLKHPHEEPSSTSKVVENRDSDTVHLDNVSANFPEISSRAVENSFPTSLVTPEKAMGHCNKLFPEGEEDMSIKTNEANVVHGSGGHRRSARLHNVKSFQKKQPATGGPATRRGKDQISASATIEKSDGGLENLSTPVQSQSGIVNTPSGKVTNKFRSKTSSAKTDASAKTEVDHKKKKVTVETEAVNPKRKDLKPPSSVKSPQGRDVSHLNKGSKQGLSMVSPESLSLKKSRSGRLLLPSMEFWRNEIPIYNADRGIKEIQQDSTLTSPFRCFSPLPFRGFSPSPGRF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi212g00041 480 MobiDBLite consensus disorder prediction 307 358 - -
Vivi212g00041 480 MobiDBLite consensus disorder prediction 273 424 - -
Vivi212g00041 480 Pfam SANTA (SANT Associated) 8 83 IPR015216 -
Vivi212g00041 480 MobiDBLite consensus disorder prediction 188 209 - -
Vivi212g00041 480 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 8 454 - -
Vivi212g00041 480 MobiDBLite consensus disorder prediction 359 388 - -
Vivi212g00041 480 MobiDBLite consensus disorder prediction 183 209 - -
Vivi212g00041 480 MobiDBLite consensus disorder prediction 393 421 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi212g00041 SANTA 1.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi212g00041 - - vvo:131626610 935.25