Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi212g00036 ATGGCGGGTCGATTTTTCGGATCTTCGGCTGCTTCGATCGCCATGATCGTCACCAATACGCCTTCCCAAGAACTCGCCCTAACCAACCTCGCCTACATCTCCGCCTCCGATCTTCCCAAATTCGCCGTTCCCGGTCACAGCAACCTCTACCTCGCTTCCATCGGCGATGTCTTCGTTTTCTCTCTCTCAGCTCATGAAAGCATACGTGGTGGTCACATTGCTTTGAATTCCATTCAGCGTCGATGTGCAAAAGTTTCTGCAGCTGAATCCGTAGATGTGACCCGATTCGTGCCGCCTGAAAATTTCAACCTGGCCATGCTTACAGTTGAATTGGACTTCGTTAAAAGGGTTGGAAGCAGGAGTGAACAGATTGATGCTCTTGTACTAGCCAAGCAACTTCGGAGAAGACTTAATAACCAGGTAATGACAGCAGGGCAGAAAGTGTTATTTGAGTTTCAGGGAAATAATTATAGCTTTACAGTCCGGGAAGCTACGGTTGAGGGCCGGGGAAAGTCCAACTCTATTGAAAGAGGGATAATTTTAGAAGACACATTCTTTGTTTTTGATGCGCCACGTGATAGTGGAATTAAGATTATCAATCAGCGCGAAGGTACTACTAGCAACATTTTTAAGCAGAAAGAATTTAACCTTGAGTCTCTGGGTATTGGTGGCCTGGGCGCAGAGTTTGCAGATATATTTCGAAGAGCTTTTGCATCTCGTGTTTTCCCTCCCCATGTGACATCTAAATTAGGGATCAAGCATGTAAAAGGCATGCTGCTTTATGGTCCTCCTGGAACTGGAAAGACTCTTATGGCACGTCAAATTGGAAAAATTTTGAACGGCAAGGATCCAAAGATTGTAAATGGCCCTGAAGTGTTGAGCAAGTTTGTGGGAGAAACTGAAAAGAATGTAAGGGACCTTTTTGCTGATGCCGAACAGGATCAGAGGACCCTAGGGGATGAAAGTGATTTGCATGTTATTATATTTGATGAAATCGATGCTATTTGTAAGTCCAGAGGCTCAACTAAAGATGGTACAGGGGTTCATGATAGCATTGTGAACCAGCTTCTTACTAAGATAGATGGTGTGGAATCACTGAACAATGTTTTGCTTATTGGAATGACTAACAGAAAGGACATGCTTGATGAAGCACTCTTAAGACCCGGGCGGTTGGAAGTCCAAGTTGAGATAAGTCTCCCGGATGAAAATGGTCGATTGCAAATTCTTCAAATTCATACTAACAAGATGAAAGAGAATTCTTTTCTAGCTTCTGATGTGAATCTTCAAGAGCTTGCTGCTCGAACTAAAAACTACAGTGGTGCGGAACTTGAAGGTGTTGTGAAAAGTGCCGTTTCATATGCTTTAAATAGACAATTGAGCCTTGAAGATCTCACTAAGCCAGTGGAGGAGGAAAACATTAAGGTTACGATGGCTGACTTTTTGAATGCACTTCATGAAGTTATTCCTGCATTTGGAGCTTCCACTGATGATCTTGAGCGATGCAGACTCCATGGCATGGTGGAGTGTGGTGATCGACATAAGCACATTTATCAGAGAGCAATGCTAGTCGCGGAGCAAGTTAAAGTGAGTAAAGGAAGCCCTCTTGTTACTTGTCTTCTGGAAGGTTATCGGGGCAGTGGTAAAACCGCACTTGCAGCTACTATTGGGATCGATAGTGACTTCGCTTATGTCAAAATAATTTCAGCTGAAACAATGATTGGTCTACATGAGAGCTCTAAATGTGCCCAGATTATTAAGGTTTTTGAGGATGCATACAAGTCACCTTTGAGCGTCATTGTTCTTGATGACATTGAGAGATTATTGGAGTATGTTCCTATTGGTCCTCGATTCTCAAACCTTATTTCTCAGACACTACTGGTTTTGCTCAAGAAACTTCCTCCAAAGGGTAAAAAACTCATGGTAATTGGAACAACTAGTGAAGTAGATTTCTTGGACTCGATTGGTTTTTGTAATAACTTCTCGATAACTTACAATGTTCCTACATTGAGCACAAATGATGCGAAGAAGGTCCTTGAACAGTTGAATGTTTTTGCGGATGACGATATTGATTCTGCCGCAGAGGCATTGGATAATATGCCTATCAAGAAGCTATACATGTTGATTGAGATGGCAGCGCAAGGTGCACAAGGTGGATCAGCAGAAGCTATCTATGCCGGCAAAGAGAAAATTAATATATCTCATTTCTTCGATTGCCTTGGAGATGTTGTCAGATTAATATAA 2241 0.4257 MAGRFFGSSAASIAMIVTNTPSQELALTNLAYISASDLPKFAVPGHSNLYLASIGDVFVFSLSAHESIRGGHIALNSIQRRCAKVSAAESVDVTRFVPPENFNLAMLTVELDFVKRVGSRSEQIDALVLAKQLRRRLNNQVMTAGQKVLFEFQGNNYSFTVREATVEGRGKSNSIERGIILEDTFFVFDAPRDSGIKIINQREGTTSNIFKQKEFNLESLGIGGLGAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKILNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTLGDESDLHVIIFDEIDAICKSRGSTKDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLASDVNLQELAARTKNYSGAELEGVVKSAVSYALNRQLSLEDLTKPVEEENIKVTMADFLNALHEVIPAFGASTDDLERCRLHGMVECGDRHKHIYQRAMLVAEQVKVSKGSPLVTCLLEGYRGSGKTALAATIGIDSDFAYVKIISAETMIGLHESSKCAQIIKVFEDAYKSPLSVIVLDDIERLLEYVPIGPRFSNLISQTLLVLLKKLPPKGKKLMVIGTTSEVDFLDSIGFCNNFSITYNVPTLSTNDAKKVLEQLNVFADDDIDSAAEALDNMPIKKLYMLIEMAAQGAQGGSAEAIYAGKEKINISHFFDCLGDVVRLI 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi212g00036 746 FunFam Vesicle-fusing ATPase 100 198 - -
Vivi212g00036 746 CDD RecA-like_NSF-SEC18_r1-like 221 397 - -
Vivi212g00036 746 Gene3D - 496 667 IPR027417 -
Vivi212g00036 746 Gene3D - 10 96 - -
Vivi212g00036 746 SUPERFAMILY ADC-like 12 96 IPR009010 -
Vivi212g00036 746 Gene3D - 99 198 - -
Vivi212g00036 746 PANTHER VESICULAR-FUSION PROTEIN NSF 13 744 IPR039812 GO:0016887|GO:0035494
Vivi212g00036 746 SMART AAA_5 254 401 IPR003593 GO:0016887
Vivi212g00036 746 SMART AAA_5 534 667 IPR003593 GO:0016887
Vivi212g00036 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 709 IPR027417 -
Vivi212g00036 746 Gene3D - 209 399 IPR027417 -
Vivi212g00036 746 Pfam Cell division protein 48 (CDC48), domain 2 126 168 IPR004201 -
Vivi212g00036 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 233 497 IPR027417 -
Vivi212g00036 746 FunFam Vesicular-fusion ATPase SEC18 210 400 - -
Vivi212g00036 746 FunFam Vesicle-fusing ATPase protein 12 96 - -
Vivi212g00036 746 ProSitePatterns AAA-protein family signature. 369 387 IPR003960 GO:0005524|GO:0016887
Vivi212g00036 746 FunFam vesicle-fusing ATPase isoform X1 496 667 - -
Vivi212g00036 746 Pfam ATPase family associated with various cellular activities (AAA) 539 653 IPR003959 GO:0005524|GO:0016887
Vivi212g00036 746 Pfam ATPase family associated with various cellular activities (AAA) 258 398 IPR003959 GO:0005524|GO:0016887
Vivi212g00036 746 Gene3D - 400 487 - -
Vivi212g00036 746 Pfam AAA+ lid domain 425 480 IPR041569 -
Vivi212g00036 746 FunFam Vesicle-fusing ATPase 400 487 - -
Vivi212g00036 746 SUPERFAMILY Cdc48 domain 2-like 99 203 IPR029067 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi212g00036 222 473 Calmodulin-binding Proteins AT3G56690 33.071 3.67e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi212g00036 K06027 - gmx:100779259 1245.72