Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi212g00019 ATGGACCCGTGGTTGTTGTTCATCGCTACTTTCATTCTTCTTTTCAATGCTGCCACCGCCACAGATCCAACTGATGTTGCTTCTGTAAAAGCTATTTTTCAAAGTTTAAATTCACCTCCCCAACTAGGTTGGCCTGCTAATGGTGATGATCCATGTGGACAGTCCTGGAAAGGCATTACTTGCTCAGGCACTCGTGTTACTCAAATAAACTTATCCAATCTTGGTCTAACCGGTACACTGGCTTACGGATTAGACGCCTTGACCTCTCTCACCAATCTAGACATGAGTAACAACAATCTTGTTGGAACCATACCATACCAACTTCCTCCAAATCTCCAACGTTTAAATTTTGCTCATAATAACTTGACTGGGACTGTCCCTTACTCTATTTCTAACCTCACCTCTCTTACTGACCTGAATCTCAATCACAATCAGCTCCAGCAACCACTCAATCTCAACTTCCAAAATCTTTCTACCCTCTCCAAATTAGACCTCTCTTTCAATTCTTTGACAGGCGACCTCCCTCAAACTATGAGCTCACTTTCAGGCATTACCACCATGTATCTGCAAAACAACCAATTTACAGGCACTATTGACATTCTTGCTAATCTGACTCTGAATAGTTTGAATGTAGAAAACAATAATTTCACAGGTTGGATACCGGAGCAGTTGAAAAACATAGACCTTCAGACGGGTGGTAATGCGTGGAGCTCAGGACCTGCACCACCCCCTCCTCCTGGGACGCCTCCAATACCTAAAAGCAAAGAGCACCACAAATCAGGTGGTGGAACTACCACTGGCCAAGATGCCGGCAGTGGCACAAAAGATGAGGGCAAAAAATCTGGAATAGGAGGTGGTGTTATAGCTGGAATTGTGATCTCCATCATTGTTGTTGGGGCACTAGTAGCATTCTTTCTGGTGAAGAGAAAATCGAAAAAGTCATCTTCTGATTTAGAAAAGTTAGGCAATCAGTCTACCGCTCCCCCTCCTTCAAATGAAGCACATGAAGTTACATCTGTGCAGACTTCTTCCGTACTTGACTTGAAGAAGTTTGACACTTCTGCCTCAATGAATCTCAAACCCCCACCTATTGATCGCCATAAATCATTTGATAACAACGAATTCTCAATTAACTCCCCTATTGTCAAGAAGACTGTGACACCTCCTACTGATGTGCAATCATATTCTATAGCCGATCTTCAGATTACTACTGGCAGCTTCAGTATGGATCATCTTATTGGTGAGGGGTCTTTCGGGCGTGTGTACCGTGCTCAATTTGATGATGGAAAGGTTCTTGCAGTGAAGAAAATAGATTCATCTGTCATTCCCAATGATTTTACAGAAGATTTTATAGAAATAGTGTCAAACATCTCCCATTTACACCATCCCAATGTAACAGAGCTTGTAGGTTATTGCTCAGAGCATGGGCAACACCTCTTAGTTTACGAGTTTCATAAAAATGGATCACTGCATGATTTCCTTCACGTGTCTGATGAATTCAGTAAACCATTGATATGGAATTCCCGTGTCAAGATAGCTCTGGGGACTGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCTCCATCAGTTGTGCATAAGAATATTAAGTCAGCCAATATATTACTTGATGCAGAGCTTAATCCTCATCTTTCAGACTGTGGATTGGCAAGCTACATTCCAAATGCAGAGCAGATACTGAACCATAATGTTGGATCGGGATATGATGCCCCTGAAGTTGCATTGTCTGGTCAGTATACCTTTAAAAGTGATATCTACAGCTTTGGGGTTGTCATGTTGGAGCTTCTAAGTGGCCGCAAACCATTTGATAGCTCAAGAGCAAGACCTGACCAGTCTCTGGTTCGATGGGCAACGCCCCAGCTTCACGACATTGATGCATTGGCTAAAATGGTTGATCCTGCCCTGAAAGGGCTATATCCTGTTAAATCTCTATCACGTTTTGCTGATGTTATTGCTCTTTGTGTTCAGCCGGAGCCTGAATTCCGACCACCAATGTCAGAGGTGGTTCAAGCACTTGTACGATTAGTGCAGCGAGCTAACATGAGCAGGCGGACAACATTTGGAAGTGATCATGGAGGATCCCTACGAGGAAGTGATGAACCAGCTATAAGAGACGTCCAAATCGGAACATAA 2154 0.4318 MDPWLLFIATFILLFNAATATDPTDVASVKAIFQSLNSPPQLGWPANGDDPCGQSWKGITCSGTRVTQINLSNLGLTGTLAYGLDALTSLTNLDMSNNNLVGTIPYQLPPNLQRLNFAHNNLTGTVPYSISNLTSLTDLNLNHNQLQQPLNLNFQNLSTLSKLDLSFNSLTGDLPQTMSSLSGITTMYLQNNQFTGTIDILANLTLNSLNVENNNFTGWIPEQLKNIDLQTGGNAWSSGPAPPPPPGTPPIPKSKEHHKSGGGTTTGQDAGSGTKDEGKKSGIGGGVIAGIVISIIVVGALVAFFLVKRKSKKSSSDLEKLGNQSTAPPPSNEAHEVTSVQTSSVLDLKKFDTSASMNLKPPPIDRHKSFDNNEFSINSPIVKKTVTPPTDVQSYSIADLQITTGSFSMDHLIGEGSFGRVYRAQFDDGKVLAVKKIDSSVIPNDFTEDFIEIVSNISHLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHVSDEFSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPHLSDCGLASYIPNAEQILNHNVGSGYDAPEVALSGQYTFKSDIYSFGVVMLELLSGRKPFDSSRARPDQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSRRTTFGSDHGGSLRGSDEPAIRDVQIGT 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi212g00019 717 Pfam Leucine rich repeat 89 146 IPR001611 GO:0005515
Vivi212g00019 717 Pfam Protein tyrosine and serine/threonine kinase 409 679 IPR001245 GO:0004672|GO:0006468
Vivi212g00019 717 Gene3D Ribonuclease Inhibitor 23 241 IPR032675 -
Vivi212g00019 717 MobiDBLite consensus disorder prediction 691 717 - -
Vivi212g00019 717 ProSiteProfiles Protein kinase domain profile. 407 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi212g00019 717 MobiDBLite consensus disorder prediction 315 339 - -
Vivi212g00019 717 MobiDBLite consensus disorder prediction 230 281 - -
Vivi212g00019 717 SUPERFAMILY L domain-like 21 226 - -
Vivi212g00019 717 Gene3D Phosphorylase Kinase; domain 1 372 484 - -
Vivi212g00019 717 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 371 484 - -
Vivi212g00019 717 Pfam Leucine rich repeat N-terminal domain 31 62 IPR013210 -
Vivi212g00019 717 CDD STKc_IRAK 413 682 - -
Vivi212g00019 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 485 693 - -
Vivi212g00019 717 Gene3D Transferase(Phosphotransferase) domain 1 486 698 - -
Vivi212g00019 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 22 247 - -
Vivi212g00019 717 PRINTS Leucine-rich repeat signature 90 103 - -
Vivi212g00019 717 PRINTS Leucine-rich repeat signature 157 170 - -
Vivi212g00019 717 ProSiteProfiles Leucine-rich repeat profile. 135 156 IPR001611 GO:0005515
Vivi212g00019 717 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 683 IPR046959 -
Vivi212g00019 717 SUPERFAMILY Protein kinase-like (PK-like) 388 679 IPR011009 -
Vivi212g00019 717 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524
Vivi212g00019 717 MobiDBLite consensus disorder prediction 318 339 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi212g00019 4 692 Strubbelig Receptor Gene Family AT1G53730 65.710 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Vivi212g00019 PK_Tyr_Ser-Thr 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi212g00019 - - psat:127132034 1291.56