Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi212g00002 ATGGATTTATACTCCTCTGGTGAAGAAGTGGTTGTTAAGACAAGAAAACCATATACAATAACAAAACAAAGAGAACGATGGACAGACGAGGAACATAATAGATTTCTAGAAGCCCTTAAGCTATATGGGCGAGCATGGCAGCGCATAGAAGAGCATATCGGAACAAAAACTGCTGTGCAAATCAGGAGCCATGCACAAAAATTCTTTTCAAAGTTGGAGAAGGAAGCTATTGTAAAAGGTTCTGCATTAGGACAAGCTCTTGACTTAGACATCCCCCCTCCCCGGCCCAAAAGAAAACCAAGCAATCCTTATCCGCGCAAGACCAATGTTGGCACCCCAACATCACATAGTGGGGCAAAGTATGGAAAGCCACTTATTGCAGTAGCATCTTCAAATGGTAAACAAGCCATGGATTTTGAGACAGAATCGCTTCCCGAGAAGCATAAAGATGAGGAAAGGCCAACAACTGTGAAAGAAAATAAAGATGAAAATTGCTCAAAAGCATTTACAATCCTCAAGGAGGCACCCTGTTCATCTGTATCCGCAGCAATCAAGAGTTCAATCTCAATGTCAGCGCCCCAGACAAATTGCTGCATCTTAAGGGAGTTTACTCCTTCAGTGAAAAATGTGATAAATCAAGATGAAACAAATAAATCTTTTCCTACTGCAGAGATTGAAAATCAGATGTTGGAGTCAGATGATGGAAAACACAAACAAATGACTGATGGCACTTGTAAAACCTCTAAATTGGAGAGTTCTTCTCATAAATCGGTTCAAGCTGAGAAAACAGATGATCTTACTTCTGCATTAACAGATGAGATGCAAAGTAATCAGAATTACCCAAGACATATCACTGTGCATGTTGTTGATGGGAACCTCGGAACTAGTACTCAAACTCCATCACAAGATGTATTAGTTCAAGACTCCGCATTTCAGCCAATAGGAGGAATTAATGGGAAACCTAATCTTTTCACAAACTCAGCTGCATCAAACACAACTGGTAGTCAAAATAACATGGCACGGTCATCTATTCATCAATCATTTCCTCCTTGTCCTCCCTTTTCACAACTTAATCATGATGATTATCAATCCTTTCTCAACAACATGTCTTCTACATTTTCAAGTCTGATTGTCTCTACCTTGCTGCAACACCCTGCAGCCCATGCTGCAGCAAGTTTTGCTGCTACATTTTGGCCCTATGCAAATGTAGAATCTTCAGCTGATTCTCCAGCTTGTTCTCAAGGAGGTTTTCCATCTAGACAAATTGGTTCACCTCCTAGTGTAGCAGCTATCGCTGCTGCTACGGTAGCTGCTGCAACTGCATGGTGGACAGCTCATGGACTGCTTCCTCTGTGCGCTCCACTCCATACAGCTTTTGCCTGTCCTCCTGCATCAACAACTGTTGTTCCATCAATGAATATCAGTGAAGTTCCACCTAAGACAGAACAAGGAGATATTACACTACAAAATCCTCCTCTGCAAGATCATAAACTAGATCAAGAAGACTCGGAAGCTTTGCAAGCTCAACATTCAGGTTCTAAGTCAACAGCTGTTTCTTCATCTGAATCAGAGGAGAGTGGAGATGCTAAGTTAAATGCTTCATCAAAGGCCACTATTAATCTTGATATAAACCAACCAATTTCTGAGAACCTTAATTCAAACCAAGTGGAGGGCAGGAAACTGGTAGACCGGTCTTCTTGTGGTTCTAACACAACCTCTGGCAGTGAAGAGACTGATGCGCTAGAGAAGGATGGGAAAGAAAAGGAAGACCCCAAAACACCTGATGCAGACCATTTAGCTATTGATCCTAGTAGTCGTCGATATAGAAGCATTAGCAACATTCTTGATTCTTGGAAGGAGGTGTCTGAAGAGGGACGGCTTGCCTTTCGGGCTCTATTCTCCAGAGAGGTGTTGCCCCAAAGCTTTTCACCTCCTCCTGATTTGATAAATAAAGATCATCAGATGGACAACATGAAGGGTATCGAGCAAAACACACCCCATCAAGATCACCTTGACAGCAAGAAATGCAGTTCTAGTTGTGACCGGTTGCAGCAAAACCTACCATTTGTACAAAATAACAGTGAGGAGGAGGGACTGCTAACCTTAGGTCTTGGACAAGGTAAACTTAAGACTCGTCGAACAGGGTTTAAACCTTACAAAAGATGTTTAGTAGAAGCGAAGGAAAACAGGATTGGAACGACTTGTAATCAAGTTGAAGAGACAGGTCCCAAGAGGATACGACTGGAAGGGGGGAGTTCTACTTGA 2265 0.4225 MDLYSSGEEVVVKTRKPYTITKQRERWTDEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEAIVKGSALGQALDLDIPPPRPKRKPSNPYPRKTNVGTPTSHSGAKYGKPLIAVASSNGKQAMDFETESLPEKHKDEERPTTVKENKDENCSKAFTILKEAPCSSVSAAIKSSISMSAPQTNCCILREFTPSVKNVINQDETNKSFPTAEIENQMLESDDGKHKQMTDGTCKTSKLESSSHKSVQAEKTDDLTSALTDEMQSNQNYPRHITVHVVDGNLGTSTQTPSQDVLVQDSAFQPIGGINGKPNLFTNSAASNTTGSQNNMARSSIHQSFPPCPPFSQLNHDDYQSFLNNMSSTFSSLIVSTLLQHPAAHAAASFAATFWPYANVESSADSPACSQGGFPSRQIGSPPSVAAIAAATVAAATAWWTAHGLLPLCAPLHTAFACPPASTTVVPSMNISEVPPKTEQGDITLQNPPLQDHKLDQEDSEALQAQHSGSKSTAVSSSESEESGDAKLNASSKATINLDINQPISENLNSNQVEGRKLVDRSSCGSNTTSGSEETDALEKDGKEKEDPKTPDADHLAIDPSSRRYRSISNILDSWKEVSEEGRLAFRALFSREVLPQSFSPPPDLINKDHQMDNMKGIEQNTPHQDHLDSKKCSSSCDRLQQNLPFVQNNSEEEGLLTLGLGQGKLKTRRTGFKPYKRCLVEAKENRIGTTCNQVEETGPKRIRLEGGSST 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi212g00002 754 MobiDBLite consensus disorder prediction 317 347 - -
Vivi212g00002 754 MobiDBLite consensus disorder prediction 232 264 - -
Vivi212g00002 754 PANTHER SWI/SNF COMPLEX-RELATED 7 637 - -
Vivi212g00002 754 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Vivi212g00002 754 MobiDBLite consensus disorder prediction 577 604 - -
Vivi212g00002 754 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Vivi212g00002 754 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Vivi212g00002 754 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Vivi212g00002 754 MobiDBLite consensus disorder prediction 319 347 - -
Vivi212g00002 754 MobiDBLite consensus disorder prediction 474 494 - -
Vivi212g00002 754 MobiDBLite consensus disorder prediction 474 531 - -
Vivi212g00002 754 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Vivi212g00002 754 MobiDBLite consensus disorder prediction 550 576 - -
Vivi212g00002 754 Gene3D - 26 73 - -
Vivi212g00002 754 MobiDBLite consensus disorder prediction 140 161 - -
Vivi212g00002 754 CDD SANT 26 69 IPR001005 -
Vivi212g00002 754 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Vivi212g00002 754 MobiDBLite consensus disorder prediction 550 604 - -
Vivi212g00002 754 MobiDBLite consensus disorder prediction 505 531 - -
Vivi212g00002 754 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Vivi212g00002 754 SMART sant 23 71 IPR001005 -
Vivi212g00002 754 MobiDBLite consensus disorder prediction 86 121 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi212g00002 Myb_DNA-binding 9.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi212g00002 K12133 - gmx:780540 978.393