Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi210g00012 ATGTATACAAACTGCAACACCACATTTCCACGCGCCGCCAACAATTTCCCCTCCCCCATAGACACCTCCTCATTGCAGCACCAGCAAACACTCTCCGAGTACGACTCGCTATCGCAACTCAACTCGGAGGTGAGTTACAATAATAATAATGCTGGTGGGAATTATAATAGCTGTAGCAGCGGGTGTACTAGCTATATGGGATCGCCGAGTTCGCTGGCGAGTTACGAGACTCAACGAGTTTCGGATAGGTTGTTGCAGAGAAGCATTAGTAGCCACTCGCTGCAAAAGAATCATGGACCCCACCGTCACCATAACCCGTTTTCTTCCCTGTTTGCTGAATTGCTTGATACAGAGAATGGTCCGGTTCGACGAGTTTACAGTGCCGGTGACATTCAGGGAGTTAATGGAATGCAACAATATTATCATCAATCAGATAGCCCTTTGTCAACAGAGAGCAACATGATAATAGAACAAATGAGCAGACCAGCTAGTCCTTACAGCCCACAGGAAAAGAAAGTCAGAATTGAAAGATATAAAACCAAGAGAAACCAGAGAAACTACAACAAAAAAATTAAGTATGTTTGCAGGAAGACATTGGCAGACAGTAGGCCACGTATTAGAGGCAGATTTGCTAAGAATGATGAAATTATAATGAACCCTCCAATTCAATGGAGCCATAATAGTAGTAATAATGGAGAGGAATTAGAAGATGATGAAGAAGAAGAAAATTGGGACAATTTCTTTCATTCATTGCTTCCTACTTCAAATCTAACTCATGATGAGTCTCAACATAGTTCTTCCTTTGGCGTGCAATATTAA 819 0.4212 MYTNCNTTFPRAANNFPSPIDTSSLQHQQTLSEYDSLSQLNSEVSYNNNNAGGNYNSCSSGCTSYMGSPSSLASYETQRVSDRLLQRSISSHSLQKNHGPHRHHNPFSSLFAELLDTENGPVRRVYSAGDIQGVNGMQQYYHQSDSPLSTESNMIIEQMSRPASPYSPQEKKVRIERYKTKRNQRNYNKKIKYVCRKTLADSRPRIRGRFAKNDEIIMNPPIQWSHNSSNNGEELEDDEEEENWDNFFHSLLPTSNLTHDESQHSSSFGVQY 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi210g00012 272 ProSiteProfiles CCT domain profile. 171 213 IPR010402 GO:0005515
Vivi210g00012 272 MobiDBLite consensus disorder prediction 221 242 - -
Vivi210g00012 272 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 14 236 IPR045281 GO:0009909
Vivi210g00012 272 Pfam CCT motif 173 213 IPR010402 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi210g00012 162 216 C2C2-CO-like Transcription Factor Family AT5G15850 43.636 3.71e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi210g00012 CCT 5.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi210g00012 - - aprc:113859774 308.531