Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi210g00005 ATGGAACCATTTACAAGAGATCACCGTGGCTCACTAGAAGTCTTCAATCCATCTTCATCTGAGAACAACGACGAAAATCCGAATCCAAATCCAAATCCCAGCAGCTCATGGAACACTTGGACAAGCTCACGCGCCACCGAAACTCCACCAACGCGCGATTCCATTATCTCCGACGAAGTCCCCGTCGCCACCTCTTGGATGGCGCTGAAAGAAACCACGGCTCCTTCAAAATCCGGCGAGTCAGGCTCCGCTGCGGAGCAGAGAGCGGCGGAGTGGGGATTAGTGCTGAAAACTGATTCAGAGACAGGAAAGCCACAGGGAGTTGGTGTTCGAGGCTCCGGTGGCGGCGGTGGTTCGAGGAGAGACTCGAACAACTCGGTGAGAAGCTCCGGTGAGTCTTCCGATGACGGAAGGGAGGGTGGTAGGGGGATTCCGAGAGTTTCGGAGGATTTGAGAGATGCTCTATCGGCTTTTCAACAAACTTTTGTGGTTTCGGATGCTACCAAACCCGATTACCCGATTATGTATGCGAGTGCCGGGTTTTTTAATATGACGGGTTATACTTCCAAAGAGGTCATAGGAAGAAACTGTCGGTTTATGCAGGGAGCTGATACGGATCCGAATGACGTGGCAAAGATAAGAGAAGCGCTTGCGGCGGGAACGAGTTATTGTGGGAGGTTATTGAATTACAAGAAGGATGGAACAACGTTCTGGAACCTTCTAACTATTGCTCCTATTAAGGACGAACATGGAAAAATACTGAAACTTATAGGAATGCAAGTGGAGGTTAGTAAGCATACAGAGGGGACCAAGGAGAAGATGCTGCGTCCCAATGGATTGCCCGAATCGTTGATTCGATATGATGCTCGTCAGAAAGAGAAGGCAAACTCAACAGTTACTGAGTTGGTGGAGGCAGTGAGCAAAAGACCACGCTCACTCAGTGAATCAGCAAACCGTCTCCCCTTCATCAAAAAGCCAACAAATGGCCATGCAACACCACCAAATTCCAAATCATCAAGGAGAAAATCTGATAGCACTTTGCGTTCATTCCGACGCAAATCACATTCAGGAGCTGACAACTTTAACTCAATGCATCCCATCACTGAGCTCCCAGAAAACAAAAACAAATCACGCCGCCGCTCTTTCATGGGGTTCATGAGGAAAAGTCTGTCAAACAATGAAAGATTAATCAATGATGAACAAGTTCTTGACGGGGATAGCTCTGAGGATGATGATAGGCCTGATAGTTTTGATGACAAAAATATTACACTAAAGAGGGAAAAGAGAAAAGGTCTTGATCTTGCTACCACACTTGAACGTATCGAGAAAAACTTTGTCATTACTGATCCAAGGCTCCCTGATAACCCCATTATCTTTGCCTCTGATAGCTTCTTAGAGCTTACCGAGTATTCTCGTGAAGAAATCTTGGGGAGAAATTGCAGGTTTCTGCAAGGACCTGAAACTGATCCTGCAACAGTGAAAAAAATAAGATATGCAATTGACAATCAAATAGAAGTTACTGTGCAGCTCATTAATTATACCAAGACTGGTAAAAAGTTCTGGAATCTGTTTCATTTGCAGCCAATGCGTGATCAGAAGGGAGAGGTACAGTATTTTATTGGAGTTCAACTTGATGGTAGTCAACATGTTGAGCCTCTTCACAACCGCATTGCAGAAGATACAGCAAAGGAGGGAGAAAATTTGGTTAAGAAAACTGCAGAAAATGTTGATGATGCATTGAGAGAACTCCCAGATGCTAATATGAAACCAGAAGATCTATGGATGAATCATTCAAAAGTGGTTCGTCCTAAACCTCATAGGAGGGAAGATGCTGCTTGGAGAGCTATTCAGAAGATCATGGAGAGTGGAGAGAAGATAGGCTTGAAGCATTTTAAGCCAATTAAACCATTAGGCTCAGGAGACACTGGCAGTGTTCATCTGGTGGAGCTATGTGGAACTAATCATCATTTTGCCATGAAGGCTATGGACAAGGGTGTTATGCTCAATCGTAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTAGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCCTTTCAGACCAAAACACATATTTGTTTGATAACTGATTACTGTCCTGGAGGAGAACTATTTATGCTGCTCGACCGCCAGCCGGCGAAGGTTCTCAAGGAAGATGCAGTGAGATTTTATGCCACTGAAGTAGTTGTTGCGTTGGAATATCTTCATTGTCAAGGGATAATATATAGGGATTTAAAGCCAGAAAATGTGTTACTACAAAGCACTGGACACGTGTCTTTAACAGATTTCGATTTATCATGTTTAACATCATGCAAACCAGAGCTCTTAGCTCCAAGTACAAATGACAAGAAGAAAGGACAGCATGGTCCAATATTTATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACAGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTAGGAATTCTTCTGTATGAAATGTTTTATGGATATACACCATTCCGGGGAAAGAATAGGCAAAGAACATTTGCGAATATTCTCCACAAGGATCTTAAATTTCCCAAAAGTAAACAGGTTAGTCTCAGTGCAAAACAGCTCATTTATCACTTGTTGCAAAGAGATCCAACTAGCAGGTTGGGCTCAAAGGGAGGAGCAAATGATATTAAGAACCATTCCTTCTTCAAGGGTATCAATTGGGCCTTAGTTAGATGCACGAAACCTCCGGAGCTCGATGCTCCTCTTTTTGATACAAACAAAGAGGAAAAGGAAAAGGAAAAGGATGACAAGTATGTAGATAATGGACAAGAGGATATGAATGTCTTCTGA 2889 0.4365 MEPFTRDHRGSLEVFNPSSSENNDENPNPNPNPSSSWNTWTSSRATETPPTRDSIISDEVPVATSWMALKETTAPSKSGESGSAAEQRAAEWGLVLKTDSETGKPQGVGVRGSGGGGGSRRDSNNSVRSSGESSDDGREGGRGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKEVIGRNCRFMQGADTDPNDVAKIREALAAGTSYCGRLLNYKKDGTTFWNLLTIAPIKDEHGKILKLIGMQVEVSKHTEGTKEKMLRPNGLPESLIRYDARQKEKANSTVTELVEAVSKRPRSLSESANRLPFIKKPTNGHATPPNSKSSRRKSDSTLRSFRRKSHSGADNFNSMHPITELPENKNKSRRRSFMGFMRKSLSNNERLINDEQVLDGDSSEDDDRPDSFDDKNITLKREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVKKIRYAIDNQIEVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIAEDTAKEGENLVKKTAENVDDALRELPDANMKPEDLWMNHSKVVRPKPHRREDAAWRAIQKIMESGEKIGLKHFKPIKPLGSGDTGSVHLVELCGTNHHFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFMLLDRQPAKVLKEDAVRFYATEVVVALEYLHCQGIIYRDLKPENVLLQSTGHVSLTDFDLSCLTSCKPELLAPSTNDKKKGQHGPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMFYGYTPFRGKNRQRTFANILHKDLKFPKSKQVSLSAKQLIYHLLQRDPTSRLGSKGGANDIKNHSFFKGINWALVRCTKPPELDAPLFDTNKEEKEKEKDDKYVDNGQEDMNVF 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi210g00005 962 ProSiteProfiles Protein kinase domain profile. 631 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi210g00005 962 SMART pas_2 149 218 IPR000014 -
Vivi210g00005 962 SMART pas_2 432 501 IPR000014 -
Vivi210g00005 962 ProSiteProfiles PAS repeat profile. 430 503 IPR000014 -
Vivi210g00005 962 SMART serkin_6 631 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi210g00005 962 MobiDBLite consensus disorder prediction 934 955 - -
Vivi210g00005 962 FunFam LOV domain-containing protein 630 714 - -
Vivi210g00005 962 Gene3D Transferase(Phosphotransferase) domain 1 715 927 - -
Vivi210g00005 962 Gene3D PAS domain 420 583 - -
Vivi210g00005 962 MobiDBLite consensus disorder prediction 12 53 - -
Vivi210g00005 962 SUPERFAMILY Protein kinase-like (PK-like) 615 933 IPR011009 -
Vivi210g00005 962 FunFam Putative LOV domain-containing protein 715 927 - -
Vivi210g00005 962 CDD STKc_phototropin_like 629 934 - -
Vivi210g00005 962 PANTHER FLIPPASE KINASE 1-RELATED 130 941 - -
Vivi210g00005 962 MobiDBLite consensus disorder prediction 396 420 - -
Vivi210g00005 962 ProSiteProfiles PAC domain profile. 221 275 IPR000700 -
Vivi210g00005 962 MobiDBLite consensus disorder prediction 69 83 - -
Vivi210g00005 962 ProSiteProfiles PAS repeat profile. 147 217 IPR000014 -
Vivi210g00005 962 MobiDBLite consensus disorder prediction 341 355 - -
Vivi210g00005 962 SUPERFAMILY PYP-like sensor domain (PAS domain) 168 260 IPR035965 -
Vivi210g00005 962 Coils Coil 562 582 - -
Vivi210g00005 962 MobiDBLite consensus disorder prediction 933 962 - -
Vivi210g00005 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672|GO:0006468
Vivi210g00005 962 Pfam PAS domain 168 264 IPR000014 -
Vivi210g00005 962 Pfam PAS domain 453 545 IPR000014 -
Vivi210g00005 962 FunFam Putative LOV domain-containing protein 161 318 - -
Vivi210g00005 962 SMART pac_2 507 549 IPR001610 -
Vivi210g00005 962 SMART pac_2 224 266 IPR001610 -
Vivi210g00005 962 MobiDBLite consensus disorder prediction 296 379 - -
Vivi210g00005 962 CDD PAS 445 545 IPR000014 -
Vivi210g00005 962 Gene3D PAS domain 161 321 - -
Vivi210g00005 962 CDD PAS 174 263 IPR000014 -
Vivi210g00005 962 ProSiteProfiles PAC domain profile. 504 558 IPR000700 -
Vivi210g00005 962 Pfam Protein kinase domain 633 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi210g00005 962 SUPERFAMILY PYP-like sensor domain (PAS domain) 446 545 IPR035965 -
Vivi210g00005 962 MobiDBLite consensus disorder prediction 1 145 - -
Vivi210g00005 962 ProSitePatterns Protein kinases ATP-binding region signature. 637 660 IPR017441 GO:0005524
Vivi210g00005 962 MobiDBLite consensus disorder prediction 356 370 - -
Vivi210g00005 962 NCBIfam PAS domain S-box protein 455 545 IPR000014 -
Vivi210g00005 962 NCBIfam PAS domain S-box protein 174 267 IPR000014 -
Vivi210g00005 962 FunFam LOV domain-containing protein 418 583 - -
Vivi210g00005 962 Gene3D Phosphorylase Kinase; domain 1 630 714 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi210g00005 6 962 AGC Kinase Gene Family AT3G45780 69.347 0.0 1338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi210g00005 Pkinase 3.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi210g00005 K20715 - gmx:100804524 1417.52