Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi210g00003 ATGAAGAAGGTAATCAATTGTTTTTCCCCAAAGGGTTCCCCCAACCGCAACCGAACCGGAAACTCTCCCCGTTCCTCTCAATCTCCTCCCACTCCGGTTTCCTCTTCCGCTCCGGCTTCCCCTTCAGCCTCTACTTCCGCAACTACTCTTGCAAGAATCAATGAACTTACTGCAGAAGCGGAGACTCTAAATTTAAATTTAGGACCTTTGCCTATACAGAAATTCCCTTTCGTTCAACTTCACTTTGCAACAGATGGTTTTAGCGCTGAAAACTGCGTGGCTAAAGGAGGTTTCGGCCGTGTTTACAGAGGAAACTTGGCTCCACAGAATCAAGAAGTAGCTATAAAGTGTCTTGACCCGAAAAGCCAGCAAGGAACCCGGGAATTCGTTACTGAGGTGGAGTTTCTGAGTAATGCAGACCACGAAAACATTGTCCGGTTGATTGGATATTGTGCTGAGAATGAGCACAGGATGATAGTTTATGAGTACATTAGGATGGGATCTTTGGAAGCACATTTACTAACCCGTAATCCAGATTTGAACCTTGCAGTTCTGGATTGGAATACAAGAGTTAGAATAGCATATGAAACAGCAAAGGGTTTGCAGTATCTGCATAGTAATATGCAGCCTCGGAGAATATACAGGGATCTAAAATGTGCAAACATTTTGTTAGGGGAAGGTTATACTGTAAAGTTATCTGATTTTGGATGTGCTAAAAAAGCCCCAGCTAATGAACGTGAACGTAACTTGACAAGGGTTTTAGGCACAGTAGGATATTTAGATCCAGCGTATTTTACAACAGGCAATTGTACAGTCCAAAATGATATTCACAGCTTTGGTGTTGTTCTTTTGGAGCTCGTCACTGGTAGAAAATGTATTGATGAAAGAAGACCAACCGAGGAACAAAGTCTCCTTATATGGGCAAAGAGAGTATTTGGTAATAGGGACAGATACGAAGAAATTGTTGATCCATTGCTAAATGGTAACTTTAATGAGCGGAGTTTACATGCACTTGTTCGTATGGCTGAATATTGTGTTAATAGCGACTCTATGAAGAAGCCCAAAATGAGTCATATTGTCGATATTTTAGGACAATTGAATCGCGCAGCTGATGAACCAAACATTCCCTAG 1131 0.4182 MKKVINCFSPKGSPNRNRTGNSPRSSQSPPTPVSSSAPASPSASTSATTLARINELTAEAETLNLNLGPLPIQKFPFVQLHFATDGFSAENCVAKGGFGRVYRGNLAPQNQEVAIKCLDPKSQQGTREFVTEVEFLSNADHENIVRLIGYCAENEHRMIVYEYIRMGSLEAHLLTRNPDLNLAVLDWNTRVRIAYETAKGLQYLHSNMQPRRIYRDLKCANILLGEGYTVKLSDFGCAKKAPANERERNLTRVLGTVGYLDPAYFTTGNCTVQNDIHSFGVVLLELVTGRKCIDERRPTEEQSLLIWAKRVFGNRDRYEEIVDPLLNGNFNERSLHALVRMAEYCVNSDSMKKPKMSHIVDILGQLNRAADEPNIP 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi210g00003 376 ProSiteProfiles Protein kinase domain profile. 87 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi210g00003 376 MobiDBLite consensus disorder prediction 1 48 - -
Vivi210g00003 376 Gene3D Phosphorylase Kinase; domain 1 47 163 - -
Vivi210g00003 376 SMART serkin_6 87 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi210g00003 376 SUPERFAMILY Protein kinase-like (PK-like) 67 363 IPR011009 -
Vivi210g00003 376 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 164 374 - -
Vivi210g00003 376 Gene3D Transferase(Phosphotransferase) domain 1 165 374 - -
Vivi210g00003 376 MobiDBLite consensus disorder prediction 10 48 - -
Vivi210g00003 376 PANTHER OS07G0668900 PROTEIN 62 371 - -
Vivi210g00003 376 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 63 163 - -
Vivi210g00003 376 Pfam Protein tyrosine and serine/threonine kinase 91 360 IPR001245 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi210g00003 73 371 Glycoside Hydrolase AT3G07070 47.826 3.00e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vivi210g00003 PK_Tyr_Ser-Thr 4.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi210g00003 - - vvo:131605113 708.753