Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi208g00006 ATGGCATCAGGTGGAACAGAAGCTTTCCCAGATTTGGGTAAACACTGCCAACTTCTTGATTGTCACCAGCTCGATTTCCTTCCTTTCACCTGTGATGGCTGCAAACAGGTTTTCTGTGTAGAACACAGATCATACAAGTCTCATGATTGTCCCAAACCCGACCACAACAGCCGAAAAGTGGTTGTTTGCGAAGAATGTTCTATGTCAATGGAGATCACCGGAGAAAACGAAGAGACGATCTTAAAGAAACACCACAGTTCAGGGAAGTGTGACCCTAGCAAGAAGAAGAAACCAACTTGTCCCGTGAAGCGTTGCAAGGAGATTTTGACGTTTTCTAATACAAGTACATGTAAAACTTGCAACATTAAGGTGTGTCTCAAGCATCGTTTTTCTGCTGATCATGCTTGTAGAAGAGGAGGTTCAGCCTCTTCTTTAACAAGTGGTGATGGTAATGGAAGTTGGAATAATAGGTTTATGGCTGCTTTAGCTTCAAGGAATAATGGTCAAGATTGTGGCAAAAAAGCTGGATCTCGTTCTAGTACTAATTCTCCTCCTAGTACTCCTTCTGTTAAAGCTTATTGA 582 0.421 MASGGTEAFPDLGKHCQLLDCHQLDFLPFTCDGCKQVFCVEHRSYKSHDCPKPDHNSRKVVVCEECSMSMEITGENEETILKKHHSSGKCDPSKKKKPTCPVKRCKEILTFSNTSTCKTCNIKVCLKHRFSADHACRRGGSASSLTSGDGNGSWNNRFMAALASRNNGQDCGKKAGSRSSTNSPPSTPSVKAY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi208g00006 193 Gene3D - 2 67 IPR035896 -
Vivi208g00006 193 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Vivi208g00006 193 SMART AN1_Zf_4 100 141 IPR000058 GO:0008270
Vivi208g00006 193 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
Vivi208g00006 193 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 8 182 - -
Vivi208g00006 193 SUPERFAMILY AN1-like Zinc finger 6 58 IPR035896 -
Vivi208g00006 193 SUPERFAMILY AN1-like Zinc finger 92 137 IPR035896 -
Vivi208g00006 193 Gene3D - 75 148 IPR035896 -
Vivi208g00006 193 ProSiteProfiles Zinc finger AN1-type profile. 94 144 IPR000058 GO:0008270
Vivi208g00006 193 MobiDBLite consensus disorder prediction 170 193 - -
Vivi208g00006 193 MobiDBLite consensus disorder prediction 167 193 - -
Vivi208g00006 193 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Vivi208g00006 193 Pfam AN1-like Zinc finger 100 137 IPR000058 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi208g00006 1 167 C2H2 Transcription Factor Family AT3G28210 64.118 2.56e-74 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi208g00006 - - aprc:113867149 307.76