Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi207g00001 ATGGGTAAAGATGTTGAGGTTCAAGAACAAGGTGCTGAATTCTCAGCAAAGGATTACCAAGATCCACCACCAGCACCACTTTTTGACGCAGCGGAGTTCAAAAAATGGTCTTTGTACAGAGCTGTTATAGCAGAGTTTGTAGCAACTCTTCTTTTTCTTTACATCACTGTTTTGACTATTATTGGTTACAAAAGACAATCTGATACCAGTATTACTGGTAACACTGAGTGTGATGGTGTTGGGCTTTTGGGTATTGCTTGGGCTTTTGGTGGTATGATCTTCGTCCTTGTTTACTGCACCGCCGGTATCTCTGGAGGACACATAAATCCAGCGGTGACATTTGGACTATTTGTGGGACGCAAGGTGTCTTTAATAAGGGCATTGCTATACATAATTGCACAATGTTTAGGTGCAATTTGTGGTGCTGGACTTGCTAAGGGTTTCCAAAAATCATACTACAACAGGTATGGTGGAGGAGCTAACACCGTTTCTGATGGTTACAGTAAAGGAACTGCTTTGGGTGCTGAGATTATTGGTACCTTTGTGCTAGTCTACACAGTCTTCTCTGCTACTGATCCTAAAAGAAGTGCTAGGGATTCTCATGTTCCTGTATTGGCACCTCTTCCCATTGGATTTGCTGTGTTCATGGTTCACTTGGCAACAATCCCCGTCACCGGAACCGGTATTAACCCCGCTAGAAGTTTCGGACCCGCCGTTATCTTCAACAACGACAAAGCTTGGGATGACCAGTGGATTTATTGGGTTGGACCATTTATTGGAGCTGCAGTGGCTGCAATCTACCACCAATACATTCTAAGAGGATCAGCAATAAAAGCTCTTGGATCCTTCAGGAGCAATGCTTAA 864 0.4363 MGKDVEVQEQGAEFSAKDYQDPPPAPLFDAAEFKKWSLYRAVIAEFVATLLFLYITVLTIIGYKRQSDTSITGNTECDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFVGRKVSLIRALLYIIAQCLGAICGAGLAKGFQKSYYNRYGGGANTVSDGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFIGAAVAAIYHQYILRGSAIKALGSFRSNA 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi207g00001 287 FunFam Probable aquaporin PIP1-2 25 287 - -
Vivi207g00001 287 NCBIfam MIP family channel protein 44 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi207g00001 287 ProSitePatterns MIP family signature. 107 115 IPR022357 -
Vivi207g00001 287 Gene3D Glycerol uptake facilitator protein. 25 287 IPR023271 -
Vivi207g00001 287 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi207g00001 287 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi207g00001 287 PRINTS Major intrinsic protein family signature 89 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi207g00001 287 PRINTS Major intrinsic protein family signature 211 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi207g00001 287 PRINTS Major intrinsic protein family signature 126 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi207g00001 287 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi207g00001 287 CDD MIP 40 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi207g00001 287 SUPERFAMILY Aquaporin-like 32 272 IPR023271 -
Vivi207g00001 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 10 276 IPR034294 -
Vivi207g00001 287 Pfam Major intrinsic protein 32 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi207g00001 1 287 Major Intrinsic Protein MIP AT3G53420 79.791 1.20e-168 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi207g00001 K09872 - gmx:732581 534.643