Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi206g00019 ATGGCAATGGCTGTTGCACAACAGAGAGATAACAGCATTGAGAGACACATTGATTCTTCTGGGAAATATGTGCGATACACTGCTGAACAGATTGAAGCTTTGGAGAAGGTTTATGTGGAATGCTCTAAGCCAAGTTCCTTGAGAAGGCAACAGCTGATTCGGGAGTGTCCGGTTTTGGGTAATATCGAGCCTAAGCAAATCAAGGTTTGGTTTCAGAATAGAAGGTGTAGAGAGAAGCAGAGAAAAGAGGCTTCTCAGCTTCAGACTGTGAACAGGAAACTAGCGGCAATGAACAAGCTGTTGACGGAGGAAAATGAGCGGTTGCAGAAACAGGTTTCGGAGCTTGTGAATGAGAATGGGTTTATGCGCCAGCAATTACAACCTGCCGTCCCAGCACCTCCAAATGCTGATGGCAGTGCTAGTGATTCTGCGGCTGCTACTCCTCGGAGCACCATGAGAGATGCTAATAGCCCTGCTGGATTCCAATCAATTGCAGAGGAAACATTGGCAGAGTTCCTTTCAAAGGCTACCGGAACTGCTGTCGAATGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATATTTGCCATTTCTCAAGGTTGCAATGGAGTGGCAGCTCGAGCCTGTGGTCTTGTTAGTTTAGAACCTTCAAAGATTGTGGAGATCCTAAAAGATCGCTCAACTTGGTTTCGGGATTGTCGGAGTTCAGAAATGTTCACAATGTTCTCTGCTGGAAATGGAGGGACCATTGAACTTCTTTACACACAGACATATTCTCCAATGACGCTGTCTACTGCTCGGGATTTCTGGACTCTAAGATACACTACAAATCTTGAAAATGGAAGTATTGTGGTTTGTGAAAGGTCGCTGTCTGGTTCTGGTGCTGGCCCTAATGCTGCTGCAGCCTCACAATTCGTGAGGGCTGAAGTGCTCCCTAGTGGCTACTTGGTTCGACCATGTGAAGGTGGAGGGTCAATCATCCACATTGTAGACCACCTAGACCTACAGGCATGGAGTGTTCCAGAAGTGCTGCGGCCATACTATGAATCATCAAAAATGGTAGCTCAGAGAATGACAATTTCTGCGCTTCGTTATATCAGGCAAATAGCTCAAGAAACAAGTGGTGAGGTAGTATATAGCATGGGCAGGCAACCTGCTGTTTTGAGAACTTTTAGCCAGCGGTTGATCAGAGGATTCAACGATGCTGTCAATGGATTCAATGATGATGGCTGGTCTGTTGTGCACTGTGATGGCGACGGGGGTGTTACTATTTCAGTAAACTCAATCAAGAATTTGAGCAGCACTTCTAATCCAGCAAGTTCCCTTTCACTCCTTGGAGGAATTGTCTGTGCCAAAGCTTCCATGTTACTCCAAAACACCACTCCCGCAGTTTTAGTTCGCTTTCTGAGGGAACATCGCTCCGAGTGGGCTGACTTTAGTGTTGATGCCTTCTCTGCTGCATCGCTTAAAGCTGGCACCTATGGCTATCCTGGAATGAGGTCGACAAGGTTCACCGGCAATCAAGCAATCATGCCTCTTGGACAGACAATTGAACATGAAGAGATGCTAGAAATCATCCGCCTTGAAGGCCACGCTCTTGGTCAAGAAGATTCTTTTGTTTCGAGAGATGTTCATCTCTTACAGTTATGTAATGGAATTGACGAGAATGCTGTGGGGGCTTGTTCTGAGCTCATATTTGCTCCAATTGACGACATGTTCCCAGAAGATGCTCCATTGGTGCCTTCTGGTTTCCGCATTGCCCTGTTGAATTCACAACCAGGAGATAAAAATAATGCAATGACAGCAAATCGAACCTTGGATTTGACATCTGGTCTTGAAATAGGCACGGCAACAACTCATGCCACTGGTGACGCATCGTGTCCTAACAATCGATGCGTGTTGACTGTTGCTTTCCAGTTTCCTTTTGAGAGTGGTCTGCAGGATAATGTTGCAGCCATGGCAAGTCAGTATGTCCGTCGCGTGATTTCCGCCGTCCAGGCAGTTGCCATCGCTATATCTCCATCCAATACTAACTCCGCCGTTGGAGCAAAACTCTCCCCTGGCTCTCCAGAAGCCCTTACGCTAGCTCAATGGATCTCCAAGAGCTATCGTAATTGTTTCGCGACGGAGCTGCTGAGATCTGAATCTCTTACCGGTGATTTAGTACTGAAACATTTGTGGCATCATCCAGATGCTATTTTATGCTGTTCTTTGAAGACGGTGCCTGTATTCATCTTCGCAAACCAGGCTGGCCTTGACATGCTGGAAACAACATTAGTGGCTCTACAAGACATCTCGCTGGACAAAATATTCGACGATCCAGCTCGCAAGAATTTGATTGGATATTTTGCAAAGCTAATGCAGCAGGGTTTTGCTTGTATGCCAGCTGGAATCTGCATGTCAACAATGGGACGACACGCGTCATACGATCAAGCTGTCGCGTGGAAAGTGCTCGCTGACGACAACAGTGTTCACTGCTTGGCTTTCTCTTTCATGAATTGGTCATTTATATAA 2526 0.4667 MAMAVAQQRDNSIERHIDSSGKYVRYTAEQIEALEKVYVECSKPSSLRRQQLIRECPVLGNIEPKQIKVWFQNRRCREKQRKEASQLQTVNRKLAAMNKLLTEENERLQKQVSELVNENGFMRQQLQPAVPAPPNADGSASDSAAATPRSTMRDANSPAGFQSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSVGIFAISQGCNGVAARACGLVSLEPSKIVEILKDRSTWFRDCRSSEMFTMFSAGNGGTIELLYTQTYSPMTLSTARDFWTLRYTTNLENGSIVVCERSLSGSGAGPNAAAASQFVRAEVLPSGYLVRPCEGGGSIIHIVDHLDLQAWSVPEVLRPYYESSKMVAQRMTISALRYIRQIAQETSGEVVYSMGRQPAVLRTFSQRLIRGFNDAVNGFNDDGWSVVHCDGDGGVTISVNSIKNLSSTSNPASSLSLLGGIVCAKASMLLQNTTPAVLVRFLREHRSEWADFSVDAFSAASLKAGTYGYPGMRSTRFTGNQAIMPLGQTIEHEEMLEIIRLEGHALGQEDSFVSRDVHLLQLCNGIDENAVGACSELIFAPIDDMFPEDAPLVPSGFRIALLNSQPGDKNNAMTANRTLDLTSGLEIGTATTHATGDASCPNNRCVLTVAFQFPFESGLQDNVAAMASQYVRRVISAVQAVAIAISPSNTNSAVGAKLSPGSPEALTLAQWISKSYRNCFATELLRSESLTGDLVLKHLWHHPDAILCCSLKTVPVFIFANQAGLDMLETTLVALQDISLDKIFDDPARKNLIGYFAKLMQQGFACMPAGICMSTMGRHASYDQAVAWKVLADDNSVHCLAFSFMNWSFI 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi206g00019 841 SUPERFAMILY Homeodomain-like 18 87 IPR009057 -
Vivi206g00019 841 SMART START_1 163 373 IPR002913 GO:0008289
Vivi206g00019 841 Pfam MEKHLA domain 698 840 IPR013978 -
Vivi206g00019 841 Pfam START domain 164 371 IPR002913 GO:0008289
Vivi206g00019 841 SMART HOX_1 19 85 IPR001356 GO:0003677
Vivi206g00019 841 CDD homeodomain 22 82 IPR001356 GO:0003677
Vivi206g00019 841 Gene3D - 198 380 IPR023393 -
Vivi206g00019 841 ProSiteProfiles START domain profile. 154 382 IPR002913 GO:0008289
Vivi206g00019 841 ProSiteProfiles 'Homeobox' domain profile. 17 81 IPR001356 GO:0003677
Vivi206g00019 841 CDD bZIP 74 113 - -
Vivi206g00019 841 SUPERFAMILY Bet v1-like 163 375 - -
Vivi206g00019 841 Gene3D - 16 89 - -
Vivi206g00019 841 Pfam Homeodomain 22 80 IPR001356 GO:0003677
Vivi206g00019 841 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 19 841 IPR044830 GO:0003700
Vivi206g00019 841 MobiDBLite consensus disorder prediction 140 157 - -
Vivi206g00019 841 Coils Coil 87 125 - -
Vivi206g00019 841 MobiDBLite consensus disorder prediction 128 157 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi206g00019 1 841 Homeobox Transcription Factor Family AT5G60690 73.325 0.0 1303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Vivi206g00019 START 2.5e-44 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi206g00019 K09338 - gmx:100804870 1294.64