Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi206g00006 ATGGCAACGGCAACATATCCACCACCACCGCCTTATTACAGGCTTTACAAAAATTACGCGCAAGACCCTCAGTCTGCCCCAGAGCCTCCACCACCAATTGAAGGAACTTACATTTGTTTCGGAGGCAGTTACACTACTAGTGATGTTCTACCAAGCTTGGAAGAACAAGGTGTTCGCCAACTCTATTCCAAGGGACCTAATATTGATTTCAAGAAGGAGCTGAGATCACTTAATGGAGAATTGCAACTACACATTTTGGAGCTTGCTGATATTCTTATTGAGAGACCATCACAATATGCAAGGAGAGTTGAAGAAATTTCAACCTTGTTCAAAAATTTACACCACCTTTTAAATTCCCTGCGTCCTCATCAGGCTAGAGCAACTTTGATTCACATTTTGGAACTTCAGATAGAGCGCCGTAAACAAGCTGTGGAAGACATTAAAAGAAATCATAGAGCATTTCACATTGTGCTTTACCATAATTTGAAAGACAATATCTAG 501 0.4072 MATATYPPPPPYYRLYKNYAQDPQSAPEPPPPIEGTYICFGGSYTTSDVLPSLEEQGVRQLYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTLFKNLHHLLNSLRPHQARATLIHILELQIERRKQAVEDIKRNHRAFHIVLYHNLKDNI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi206g00006 166 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 154 IPR009244 GO:0003712|GO:0006357|GO:0016592
Vivi206g00006 166 Coils Coil 130 150 - -
Vivi206g00006 166 Gene3D - 60 158 IPR044888 -
Vivi206g00006 166 Pfam MED7 protein 4 152 IPR009244 GO:0003712|GO:0006357|GO:0016592
Vivi206g00006 166 SUPERFAMILY Mediator hinge subcomplex-like 67 151 IPR037212 GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Vivi206g00006 Med7 3.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi206g00006 K15148 - gmx:100792250 259.61