Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi205g00002 ATGCCAACAGTGTGGTTTTCTCTGAAGAAGTCACTACATTGCAAATCAGAACCCTCAGATGTACATGATCCAAAAACAAGGAAGCATTTAAGCACAATCTTGACAAAAAAAGGAGGAAGATCAGGTTGTTCAAGGTCAATAGCAAATCTAAAAGATGTTATCCATGGAAGCAAACGCCATCTTGAGAAGCCACCAAGTTGCAGTCCAAGATCTATTGGTAGCAGTGAGTTTCTCAACCCAATAACTCATGAAGTCATTTTGAGTAACTCAAGGTGTGAGCTTAAAATCACTGGTTTTCAAGAAGGGGTTAATGGTGGTGGTAACAATGCTAGTGGAAGTAGTGGTGGTGGTTCTTCAACTTTTGTTGGTACTTTGAGACCTGGAACACCTGGACCTGGAGGACACCCTACAATGCATTACTTTAACCCTTCTTTTAGGACTTCTTCTACTCCTCCAAGGAAATCTCCTTTTCTGTTATCAGAAGGGTCTGGTTTTCATGGTGGTGGTGGTGTTCATTCTAGTAATAGGATGTCCCTTGAGACAGATGCTAATGGCTCCTCAACTGTTACTTGTCACAAATGTGGAGAACAGTTTAGCAAATGGGAAGCTGCTGAAACTCACCATCTTTCCAAGCATGCTGTTACTGAACTTGTGGAAGGAGATTCATCAAGGAAAATAGTGGAGATAATATGCAGGACAAGTTGGTTAAAGTCAGAAAACCACTGTGGTAGAATTGAGAGAGTTTTGAAGGTGCACAACATGCAAAAGACATTAGCTAGATTCGAAGAGTACAGAGAGATGGTAAAAATCAAAGCAAGCAAACTCCAGAAGAAACATCCTAGGTGTTTAGCCGACGGAAACGAGCTTTTAAGGTTCTACGGAACCAGTGTTGCTTGTTCTCTTGGTCTCAATGGTTCATCTAGTCTTTGCCTATCAGAAAAATGCTGTGTTTGTAGAATTATCAGGAATGGTTTTTCTGCTAAGAAGGAGCTGAAAGGTGGTATAGGTGTTTTCACAACTTCCACAAGTGGAAGAGCTTTTGAGTCTATAGAGATTCTTGATAATGAACCATCTCTAAGAAAGGCGTTGATAGTATGCAGAGTAATCGCCGGCAGGGTTCATAGGCCGCTCGAGAACATTCAGGAAATGGCAGCTCAAACTGGATTTGATTCATTGGCTGGAAAAGTCGGTCTTTACTCAAATATCGAAGAGCTATATTTGCTTAATCCTAGAGCTCTTCTTCCTTGTTTTGTGGTAATTTGCAAACCATGA 1272 0.4104 MPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKKGGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFQEGVNGGGNNASGSSGGGSSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEGSGFHGGGGVHSSNRMSLETDANGSSTVTCHKCGEQFSKWEAAETHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTSVACSLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEILDNEPSLRKALIVCRVIAGRVHRPLENIQEMAAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi205g00002 423 MobiDBLite consensus disorder prediction 105 125 - -
Vivi205g00002 423 ProSitePatterns Zinc finger C2H2 type domain signature. 191 212 IPR013087 -
Vivi205g00002 423 FunFam C2H2-like zinc finger protein 213 422 - -
Vivi205g00002 423 MobiDBLite consensus disorder prediction 105 134 - -
Vivi205g00002 423 SUPERFAMILY ADP-ribosylation 214 422 - -
Vivi205g00002 423 Gene3D - 204 422 - -
Vivi205g00002 423 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 421 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi205g00002 1 423 C2H2 Transcription Factor Family AT5G54630 69.330 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi205g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi205g00002 - - gmx:100785097 737.643