Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi202g00024 ATGGGTGTGGTTTTTCCATTGATTCTGTTTCTGGTGAAGCTTTGTGTTATGCAAGGATCTGAAGGGTCTGTTATATCCCCATCTCCAGCATTTCTTCCTTCTGTTCATCATAATGGAGAAGCACCTGGTCCTATCCATAATGGACAGTCATGGCAAAGCAATGCATCAAGCCCTTTTGATCCACATGGGTCTGTTATATCGCCGTCTCCAGCAACATTACATGTGGATCTTTCCCCTAGTGAAGCACCGAGTCTTTTACCCTCAAATGGGTCTTTTGTACAACCTCCAGTTGCATTACCACCGTCTATATTAGCGCCAACTCCTCAGAAGATTAAAGGAATTGAATCATCCATGTCACCTAGTCCTAGTCCAAGCACCAAATCTTTATCTCCACAATATAAGGTTGTTCCAGCACCATCAACTGCTGAAAGGAATTTTCCACCATCCATACAGCCAATTCCACCTCAACGGAAAGCACCTACTGTTAGTCCTCCTATATCTACACCAATTGCTCCAGCTCTTGTTGCAATACCTCCTGAAATTTTGCCAAAAACTTCACCTATCAGTCAACCAATTGAACATGGAAGCTTGCCTCCTAAGATTGATAAGAGAAATGAAAGCAAGAGTCACAATTTAGAGCCAGTTTCACCAGGTTCTTTCTTGCAACCTCCAGTTGCGTTACCACCTAATACATCAGCTCCAACTTCTCCGAAGATTAAAGGAATTGAATCATCCATATCGCCTAGTCCTAGTCCAAACATCAAATCGTTATCGCCAGCATATAAGGCTGTTCCTGCACCATCAACTGTTGAAAGGAATTTGCCACCATTGATGCAACCAATTTCACCTCGAGTGAAAGCACCTATTGTCAGGCCTCCTGTATCCACACCAATTGCTCCAGCTCCTTCTGCAACACCTTCTGGAAATTTGCCTGTTACTTCACCTATCAGCCAACCAATTGTGCATGGAAGTTTTCCTCCTACGGTTGATAGGAGGAATGAAAGTAAGAGTCACAACCTAGAGCCAGTTTCACAAGCCCCAGTTGCAACACCTTCTACCGATGTGCCCAAAACTTCACCACTAAGCCCTTCAACTGCTAATGGAAGTTTTCCTCCTAATTCTCACAGAGAGGGTACACCTACAAATAAAGGTCACCCTCGAGAAACAATTTCACCAGACACAGCTCCTGTATTCAATTTACCGAAATATTCGCCAGTGAATCAACCAACTGAACCTGGAAGCTTGCCTCCAACTGTCCATAAAAGAAACTCCAGTATCAGTCACACATTGGAGCCAGTTTCACAGGCCCCGGTTGCAGAACCGCCTACAAGTTTTCCAAAAAGTTCACCAGTCAGCCAACCAACTCATGGAAGTTTTCCACCTAATATTCATAATAGAACTGTACATAAGGGACACATTCATACACCAGAGCCAATAATGCCACCAGTAGCTACATCACCAACAAGTACATTTCCAGTAGATCCACCATTGGTCCACCATGTCATACCTGCAGCATCTCCATCTGAACTACCAGCACCTGTCATCTCTCCCTCATTAACACCTTCCAGAAACTTCAAAAACGGTGGAGAACCTGTTTCTGCGCCTTTGTATAAAACACCGAAGTCTCCACCAACTTCAGCTCATTCCCCTGTTCAAGCTCCTGAACATAAAGCAAGGCCATCACATCATGCTCCTGAGCCACTGATTTCACCTCCTAAATCTCCTTTCAATAAAGAAGATCATTCTCCTGCACCTTCACCTTCTACCGCAGTTTATAAGCATCAGCCTACACGGAACACGATAACCAGTCCAGCTCCTGCATCATCATATTTTGTTTCTTCTCCCACTTCAAAACACCAAGATCAACCAATTCCTCCCTCATTTCTTCCAACAAGTAGACGGAGACATTATGCTCCACCACCAATGAACACAGGTTTTGCAGATTCTCCATTTACCTTTCCTATTCAATCACCAGTGAGCCAGGTTTCACCTGCTCCTTCTCCATCATTCAAGATTTCCCCTCATTCAACCAAAATTCCATTTCATCCTCCTGCAGTATCTCCTTCACGGCCTTTTTCGAAGAGCCCTAAGAAGCCAGTATTGCCTCGGGTTCAAGCATTACCACCCCCACCTCCCAATGAAGATTGTATATCATATATTTGCTCGGAGCCTTATGCGAATTCTCCACCCGGGGTGCCCTGCATGTGTGTCTGGCCAATGAGAGTTGGCCTTCGCCTCAGTGTTCCTCTGTATACCTTCTTCCCTTTGGTTTCGGAGCTTGCTTCTGAACTAGCCAGCGGGGTTTTCATGAAACAAAGTCAAGTTCGAATTATGGGGGCCAACGCAGCAACTGAGCAGCCAGATAAAACCGATGCTCTCATCGATTTTGTACCACTTGGGGAACAATTTGACAACACTACGGCCTTTATAACTGCTGAGAGGTTTTGGCATAAACAAGTTGTTATAAAAGCTTCTTACTTTGGAGATTATGAAGTGTTATATATAAGCTATCCAGGTTTACCTCCATCTCCTCCATTACCACCTTCAAGCGTTAACATGATAGATGGTGGTCCATATTCAAATAATGGCAATAATGGCAGGACAATAAAGCCTCTTGGGGTTGACATACAAAAGAAGCAGCATAACAGTGGACTTAGCAAGGGCATTATAGCTATTATTGCCCTTTCAGCTTTTCTAGCAATTGTTTTATGCTCTGCTGCTGTTTTCGCCTTATTCAAATTCCGAGATCATGTGCCTGAATCTCAACCAACATCAACCCCACGGGGTTTTCCGCCGACTCTTGCCAAAGCATCAGGTGCTGCTGGGCCATCAGTTGGAGGTGCAGTTACTTCCGCTTCAACTTCATTTCGGTCTAGCATTGCTGCTTATGCAGGGTCTGCTAAGACTTTCAGTATGAACGAAATAGAGAAAGCAACTGATAATTTTCACCCTTCTAGAATACTTGGAGAAGGAGGTTTTGGTCTTGTTTATAGATGTGACCTTGAAGATGGTTCAAAAGTAGCAGTCAAAGTTCTAAAGAGGGAGGATCATCATGGAGATCGTGAATTCTTATCAGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAATTTGGTAAAGCTGATTGGTATATGTACAGAACTCACCTCCCGCTGTCTGGTTTACGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGAGTTGACAGGGAAAAAAGCCCGCTTGATTGGAGTACTCGGATAAAGATAGCACTTGGTGCTGCTCGTGGTCTTGCTTATTTGCATGAAGATTCAAGTCCACATGTCATACATAGGGATTTCAAATCTAGCAATATATTGCTGGAAAATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCTCGAACGGCAGCTGATGAGGATAACAGGCACATATCTACACGTGTCATGGGAACTTTCGGATATGTGGCTCCCGAGTACGCAATGACCGGGCATCTTCTCGTGAAGAGTGACGTATACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCAGTGGACTTTTCACAACCGCCTGGTCAAGAGAATCTCGTTGCATGGGCCCGTCCCCTTCTAACAAGTAGAGAAGGACTTGAAGCAATAATCGATCCATCTCTAGGAACCAATGTTCCTTTTGATAGTGTGGCTAAAGTTGCGGCCATCGCTTCAATGTGTGTACAACCAGAGGTTTCAGATCGTCCTTTCATGGGCGAGGTTGTTCAGGCTTTAAAACTCGTGTGTAATGAATGTGATGAAGCAAAAGAGACAGGTTCAACAAGTTCTAGCAAAGACGATTTATCTTCAGATTTCAATGCTGCTTCTGAACAACAATCCAATAATTTCCAAAGCCATTTCGCAGCGGGTAACTATGACTTCGGAGTTGATATCGAAAACGGATTGTCAGCATCAGAGATATTCAGCTCGTCAGCAAGATTTGGAAGGCAAGTATCTGGATCATTTAGAAGACATTCATATTCGGGTCCTCTAAGAACCGTAAGAAGCAAGCGGTTATGGCAGATAATTCAAAAGCTTTCTGGCGGTACTGTTAGTGAACACGCGAATATGTTCAAGTAA 4110 0.4387 MGVVFPLILFLVKLCVMQGSEGSVISPSPAFLPSVHHNGEAPGPIHNGQSWQSNASSPFDPHGSVISPSPATLHVDLSPSEAPSLLPSNGSFVQPPVALPPSILAPTPQKIKGIESSMSPSPSPSTKSLSPQYKVVPAPSTAERNFPPSIQPIPPQRKAPTVSPPISTPIAPALVAIPPEILPKTSPISQPIEHGSLPPKIDKRNESKSHNLEPVSPGSFLQPPVALPPNTSAPTSPKIKGIESSISPSPSPNIKSLSPAYKAVPAPSTVERNLPPLMQPISPRVKAPIVRPPVSTPIAPAPSATPSGNLPVTSPISQPIVHGSFPPTVDRRNESKSHNLEPVSQAPVATPSTDVPKTSPLSPSTANGSFPPNSHREGTPTNKGHPRETISPDTAPVFNLPKYSPVNQPTEPGSLPPTVHKRNSSISHTLEPVSQAPVAEPPTSFPKSSPVSQPTHGSFPPNIHNRTVHKGHIHTPEPIMPPVATSPTSTFPVDPPLVHHVIPAASPSELPAPVISPSLTPSRNFKNGGEPVSAPLYKTPKSPPTSAHSPVQAPEHKARPSHHAPEPLISPPKSPFNKEDHSPAPSPSTAVYKHQPTRNTITSPAPASSYFVSSPTSKHQDQPIPPSFLPTSRRRHYAPPPMNTGFADSPFTFPIQSPVSQVSPAPSPSFKISPHSTKIPFHPPAVSPSRPFSKSPKKPVLPRVQALPPPPPNEDCISYICSEPYANSPPGVPCMCVWPMRVGLRLSVPLYTFFPLVSELASELASGVFMKQSQVRIMGANAATEQPDKTDALIDFVPLGEQFDNTTAFITAERFWHKQVVIKASYFGDYEVLYISYPGLPPSPPLPPSSVNMIDGGPYSNNGNNGRTIKPLGVDIQKKQHNSGLSKGIIAIIALSAFLAIVLCSAAVFALFKFRDHVPESQPTSTPRGFPPTLAKASGAAGPSVGGAVTSASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYRCDLEDGSKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELTSRCLVYELIPNGSVESHLHGVDREKSPLDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEAIIDPSLGTNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKETGSTSSSKDDLSSDFNAASEQQSNNFQSHFAAGNYDFGVDIENGLSASEIFSSSARFGRQVSGSFRRHSYSGPLRTVRSKRLWQIIQKLSGGTVSEHANMFK 1369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 301 321 - -
Vivi202g00024 1369 PANTHER OS01G0750732 PROTEIN 708 1282 - -
Vivi202g00024 1369 Gene3D Transferase(Phosphotransferase) domain 1 1058 1282 - -
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 513 527 - -
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 232 256 - -
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 581 627 - -
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 112 135 - -
Vivi202g00024 1369 FunFam receptor-like serine/threonine-protein kinase ALE2 955 1057 - -
Vivi202g00024 1369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1104 1116 IPR008271 GO:0004672|GO:0006468
Vivi202g00024 1369 Pfam Protein tyrosine and serine/threonine kinase 985 1255 IPR001245 GO:0004672|GO:0006468
Vivi202g00024 1369 Gene3D Phosphorylase Kinase; domain 1 954 1057 - -
Vivi202g00024 1369 CDD STKc_IRAK 988 1256 - -
Vivi202g00024 1369 SUPERFAMILY Protein kinase-like (PK-like) 963 1255 IPR011009 -
Vivi202g00024 1369 ProSitePatterns Protein kinases ATP-binding region signature. 988 1010 IPR017441 GO:0005524
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 36 80 - -
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 112 162 - -
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 184 258 - -
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 288 491 - -
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 1266 1285 - -
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 45 63 - -
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 683 707 - -
Vivi202g00024 1369 FunFam Receptor-like serine/threonine-protein kinase ALE2 1058 1277 - -
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 339 388 - -
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 507 636 - -
Vivi202g00024 1369 ProSiteProfiles Protein kinase domain profile. 982 1258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 148 162 - -
Vivi202g00024 1369 MobiDBLite consensus disorder prediction 401 432 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi202g00024 391 1365 Receptor kinase-like Gene Family AT5G56890 51.870 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vivi202g00024 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi202g00024 - - psat:127136544 2390.92