Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi202g00020 ATGGGTGTGGTTTTTCCATTGATTCTGTTTCTGGTGAAGCTTTGTGTTATGCAAGGATCTGAAGGGTCTGTTATATCCCCATCTCCAGCATTTCTTCCTTCTGTTCATCATAATGGAGAAGCACCTGGTCCTATCCATAATGGACAGTCATGGCAAAGCAATGCATCAAGCCCTTTTGATCCACATGGGTCTGTTATATCGCCGTCTCCAGCAACATTACATGTGGATCTTTCCCCTAGTGAAGCACCGAGTCTTTTACCCTCAAATGGGTCTTTTGTACAACCTCCAGTTGCATTACCACCGTCTATATTAGCGCCAACTCCTCAGAAGATTAAAGGAATTGAATCATCCATGTCACCTAGTCCTAGTCCAAGCACCAAATCTTTATCTCCACAATATAAGGTTGTTCCAGCACCATCAACTGCTGAAAGGAATTTTCCACCATCCATACAGCCAATTCCACCTCAACGGAAAGCACCTACTGTTAGTCCTCCTATATCTACACCAATTGCTCCAGCTCTTGTTGCAATACCTCCTGAAATTTTGCCAAAAACTTCACCTATCAGTCAACCAATTGAACATGGAAGCTTGCCTCCTAAGATTGATAAGAGAAATGAAAGCAAGAGTCACAATTTAGAGCCAGTTTCACCAGGTTCTTTCTTGCAACCTCCAGTTGCGTTACCACCTAATACATCAGCTCCAACTTCTCCGAAGATTAAAGGAATTGAATCATCCATATCGCCTAGTCCTAGTCCAAACATCAAATCGTTATCGCCAGCATATAAGGCTGTTCCTGCACCATCAACTGTTGAAAGGAATTTGCCACCATTGATGCAACCAATTTCACCTCGAGTGAAAGCACCTATTGTCAGGCCTCCTGTATCCACACCAATTGCTCCAGCTCCTTCTGCAACACCTTCTGGAAATTTGCCTGTTACTTCACCTATCAGCCAACCAATTGTGCATGGAAGTTTTCCTCCTACGGTTGATAGGAGGAATGAAAGTAAGAGTCACAACCTAGAGCCAGTTTCACAAGCAGTAGCTACATCACCAACAAGTACATTTCCAGTAGATCCACCATTGGTCCACCATGTCATACCTGCAGCATCTCCATCTGAACTACCAGCACCTGTCATCTCTCCCTCATTAACACCTTCCAGAAACTTCAAAAACGGTGGAGAACCTGTTTCTGCGCCTTTGTATAAAACACCGAAGTCTCCACCAACTTCAGCTCATTCCCCTGTTCAAGCTCCTGAACATAAAGCAAGGCCATCACATCATGCTCCTGAGCCACTGATTTCACCTCCTAAATCTCCTTTCAATAAAGAAGATCATTCTCCTGCACCTTCACCTTCTACCGCAGTTTATAAGCATCAGCCTACACGGAACACGATAACCAGTCCAGCTCCTGCATCATCATATTTTGTTTCTTCTCCCACTTCAAAACACCAAGATCAACCAATTCCTCCCTCATTTCTTCCAACAAGTAGACGGAGACATTATGCTCCACCACCAATGAACACAGGTTTTGCAGATTCTCCATTTACCTTTCCTATTCAATCACCAGTGAGCCAGGTTTCACCTGCTCCTTCTCCATCATTCAAGATTTCCCCTCATTCAACCAAAATTCCATTTCATCCTCCTGCAGTATCTCCTTCACGGCCTTTTTCGAAGAGCCCTAAGAAGCCAGTATTGCCTCGGGTTCAAGCATTACCACCCCCACCTCCCAATGAAGATTGTATATCATATATTTGCTCGGAGCCTTATGCGAATTCTCCACCCGGGGTGCCCTGCATGTGTGTCTGGCCAATGAGAGTTGGCCTTCGCCTCAGTGTTCCTCTGTATACCTTCTTCCCTTTGGTTTCGGAGCTTGCTTCTGAACTAGCCAGCGGGGTTTTCATGAAACAAAGTCAAGTTCGAATTATGGGGGCCAACGCAGCAACTGAGCAGCCAGATAAAACCGATGCTCTCATCGATTTTGTACCACTTGGGGAACAATTTGACAACACTACGGCCTTTATAACTGCTGAGAGGTTTTGGCATAAACAAGTTGTTATAAAAGCTTCTTACTTTGGAGATTATGAAGTGTTATATATAAGCTATCCAGGTTTACCTCCATCTCCTCCATTACCACCTTCAAGCGTTAACATGATAGATGGTGGTCCATATTCAAATAATGGCAATAATGGCAGGACAATAAAGCCTCTTGGGGTTGACATACAAAAGAAGCAGCATAACAGTGGACTTAGCAAGGGCATTATAGCTATTATTGCCCTTTCAGCTTTTCTAGCAATTGTTTTATGCTCTGCTGCTGTTTTCGCCTTATTCAAATTCCGAGATCATGTGCCTGAATCTCAACCAACATCAACCCCACGGGGTTTTCCGCCGACTCTTGCCAAAGCATCAGGTGCTGCTGGGCCATCAGTTGGAGGTGCAGTTACTTCCGCTTCAACTTCATTTCGGTCTAGCATTGCTGCTTATGCAGGGTCTGCTAAGACTTTCAGTATGAACGAAATAGAGAAAGCAACTGATAATTTTCACCCTTCTAGAATACTTGGAGAAGGAGGTTTTGGTCTTGTTTATAGATGTGACCTTGAAGATGGTTCAAAAGTAGCAGTCAAAGTTCTAAAGAGGGAGGATCATCATGGAGATCGTGAATTCTTATCAGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAATTTGGTAAAGCTGATTGGTATATGTACAGAACTCACCTCCCGCTGTCTGGTTTACGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGAGTTGACAGGGAAAAAAGCCCGCTTGATTGGAGTACTCGGATAAAGATAGCACTTGGTGCTGCTCGTGGTCTTGCTTATTTGCATGAAGATTCAAGTCCACATGTCATACATAGGGATTTCAAATCTAGCAATATATTGCTGGAAAATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCTCGAACGGCAGCTGATGAGGATAACAGGCACATATCTACACGTGTCATGGGAACTTTCGGATATGTGGCTCCCGAGTACGCAATGACCGGGCATCTTCTCGTGAAGAGTGACGTATACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCAGTGGACTTTTCACAACCGCCTGGTCAAGAGAATCTCGTTGCATGGGCCCGTCCCCTTCTAACAAGTAGAGAAGGACTTGAAGCAATAATCGATCCATCTCTAGGAACCAATGTTCCTTTTGATAGTGTGGCTAAAGTTGCGGCCATCGCTTCAATGTGTGTACAACCAGAGGTTTCAGATCGTCCTTTCATGGGCGAGGTTGTTCAGGCTTTAAAACTCGTGTGTAATGAATGTGATGAAGCAAAAGAGACAGGTTCAACAAGTTCTAGCAAAGACGATTTATCTTCAGATTTCAATGCTGCTTCTGAACAACAATCCAATAATTTCCAAAGCCATTTCGCAGCGGGTAACTATGACTTCGGAGTTGATATCGAAAACGGATTGTCAGCATCAGAGATATTCAGCTCGTCAGCAAGATTTGGAAGGCAAGTATCTGGATCATTTAGAAGACATTCATATTCGGGTCCTCTAAGAACCGTAAGAAGCAAGCGGTTATGGCAGATAATTCAAAAGCTTTCTGGCGGTACTGTTAGTGAACACGCGAATATGTTCAAGTAA 3702 0.4379 MGVVFPLILFLVKLCVMQGSEGSVISPSPAFLPSVHHNGEAPGPIHNGQSWQSNASSPFDPHGSVISPSPATLHVDLSPSEAPSLLPSNGSFVQPPVALPPSILAPTPQKIKGIESSMSPSPSPSTKSLSPQYKVVPAPSTAERNFPPSIQPIPPQRKAPTVSPPISTPIAPALVAIPPEILPKTSPISQPIEHGSLPPKIDKRNESKSHNLEPVSPGSFLQPPVALPPNTSAPTSPKIKGIESSISPSPSPNIKSLSPAYKAVPAPSTVERNLPPLMQPISPRVKAPIVRPPVSTPIAPAPSATPSGNLPVTSPISQPIVHGSFPPTVDRRNESKSHNLEPVSQAVATSPTSTFPVDPPLVHHVIPAASPSELPAPVISPSLTPSRNFKNGGEPVSAPLYKTPKSPPTSAHSPVQAPEHKARPSHHAPEPLISPPKSPFNKEDHSPAPSPSTAVYKHQPTRNTITSPAPASSYFVSSPTSKHQDQPIPPSFLPTSRRRHYAPPPMNTGFADSPFTFPIQSPVSQVSPAPSPSFKISPHSTKIPFHPPAVSPSRPFSKSPKKPVLPRVQALPPPPPNEDCISYICSEPYANSPPGVPCMCVWPMRVGLRLSVPLYTFFPLVSELASELASGVFMKQSQVRIMGANAATEQPDKTDALIDFVPLGEQFDNTTAFITAERFWHKQVVIKASYFGDYEVLYISYPGLPPSPPLPPSSVNMIDGGPYSNNGNNGRTIKPLGVDIQKKQHNSGLSKGIIAIIALSAFLAIVLCSAAVFALFKFRDHVPESQPTSTPRGFPPTLAKASGAAGPSVGGAVTSASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYRCDLEDGSKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELTSRCLVYELIPNGSVESHLHGVDREKSPLDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEAIIDPSLGTNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKETGSTSSSKDDLSSDFNAASEQQSNNFQSHFAAGNYDFGVDIENGLSASEIFSSSARFGRQVSGSFRRHSYSGPLRTVRSKRLWQIIQKLSGGTVSEHANMFK 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi202g00020 1233 MobiDBLite consensus disorder prediction 301 321 - -
Vivi202g00020 1233 MobiDBLite consensus disorder prediction 112 135 - -
Vivi202g00020 1233 Gene3D Phosphorylase Kinase; domain 1 818 921 - -
Vivi202g00020 1233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 968 980 IPR008271 GO:0004672|GO:0006468
Vivi202g00020 1233 Pfam Protein tyrosine and serine/threonine kinase 849 1119 IPR001245 GO:0004672|GO:0006468
Vivi202g00020 1233 MobiDBLite consensus disorder prediction 547 571 - -
Vivi202g00020 1233 MobiDBLite consensus disorder prediction 1130 1149 - -
Vivi202g00020 1233 FunFam receptor-like serine/threonine-protein kinase ALE2 819 921 - -
Vivi202g00020 1233 MobiDBLite consensus disorder prediction 36 80 - -
Vivi202g00020 1233 Gene3D Transferase(Phosphotransferase) domain 1 922 1146 - -
Vivi202g00020 1233 MobiDBLite consensus disorder prediction 339 356 - -
Vivi202g00020 1233 MobiDBLite consensus disorder prediction 112 162 - -
Vivi202g00020 1233 SUPERFAMILY Protein kinase-like (PK-like) 827 1119 IPR011009 -
Vivi202g00020 1233 MobiDBLite consensus disorder prediction 301 494 - -
Vivi202g00020 1233 CDD STKc_IRAK 852 1120 - -
Vivi202g00020 1233 MobiDBLite consensus disorder prediction 45 63 - -
Vivi202g00020 1233 MobiDBLite consensus disorder prediction 232 254 - -
Vivi202g00020 1233 ProSiteProfiles Protein kinase domain profile. 846 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi202g00020 1233 FunFam Receptor-like serine/threonine-protein kinase ALE2 922 1141 - -
Vivi202g00020 1233 MobiDBLite consensus disorder prediction 184 254 - -
Vivi202g00020 1233 MobiDBLite consensus disorder prediction 377 391 - -
Vivi202g00020 1233 MobiDBLite consensus disorder prediction 445 491 - -
Vivi202g00020 1233 ProSitePatterns Protein kinases ATP-binding region signature. 852 874 IPR017441 GO:0005524
Vivi202g00020 1233 MobiDBLite consensus disorder prediction 148 162 - -
Vivi202g00020 1233 PANTHER OS01G0750732 PROTEIN 572 1146 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi202g00020 229 1229 Receptor kinase-like Gene Family AT5G56890 50.786 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vivi202g00020 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi202g00020 - - psat:127136544 1855.88