Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi202g00019 | ATGTCTGACCATGTTGCTGAGAGAAAGCAAGAGCTTCAGCTATTCACTGCACCACAACCAGAAATCGAAACACCAAACACCAATACCACCGTAGATAACAATCATCATGTGTCTTCCTCCACTGCCTCTCGCCGCCCCCGGGGGCGTCCTCTTGGCTCTAGGAACAAACCTAAGATGCCTGTCATAGTAACACATGACAATACTAATGTTGTAAGTTCTCATGTCCTTGAGATTAGGGCTGGAGACGACATATCAAAAAGTGTCTTTGATTACGCTCACCGTCAGGAGAGGGGCATATGCATTCTCAATGGTGATGGATTGGTGACACATGTTAGACTTCGGTTACCCACAGGAAGAGTTGCAACCCTACAAGGAAGGTTTGAGATTCTTTTGATATCTGGGACAGTTTTTCCAACGCCAACACCGATGAATGTTGGAGGATTGACAGTTTACTTATCTGGAATAAATGAACAAGTGATTGGGGGAAGTGTGATCCCCCCTTTGGTGGCTTCAAGTCTAGTGACTTTGACGGTTGCTTCCTTTGCAAACACTGCACCAGAAAAACTTTCTTCGGTGGTAGTTGATAAAAAAGAACATCGCCTTCCATGCATCGATGGAGTTGGACAAGTGAGAGTAAGTGATCATGACTTGTCCAATGCTGGAGATTCAACATCTGGAATGAGAAACATGATGAGTAGCAACATCAGTTATCCATCATCCTCTACTCAAGATCATATATTTGGATGGGAGACTACTGCAACCGTAACTCCCCCACCCAAACATCCCCGTTTCTAG | 795 | 0.4491 | MSDHVAERKQELQLFTAPQPEIETPNTNTTVDNNHHVSSSTASRRPRGRPLGSRNKPKMPVIVTHDNTNVVSSHVLEIRAGDDISKSVFDYAHRQERGICILNGDGLVTHVRLRLPTGRVATLQGRFEILLISGTVFPTPTPMNVGGLTVYLSGINEQVIGGSVIPPLVASSLVTLTVASFANTAPEKLSSVVVDKKEHRLPCIDGVGQVRVSDHDLSNAGDSTSGMRNMMSSNISYPSSSTQDHIFGWETTATVTPPPKHPRF | 264 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi202g00019 | 264 | ProSiteProfiles | PPC domain profile profile. | 68 | 202 | IPR005175 | - | |
Vivi202g00019 | 264 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 73 | 182 | IPR005175 | - | |
Vivi202g00019 | 264 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 69 | 189 | - | - | |
Vivi202g00019 | 264 | CDD | DUF296 | 74 | 181 | IPR005175 | - | |
Vivi202g00019 | 264 | Gene3D | - | 72 | 200 | - | - | |
Vivi202g00019 | 264 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
Vivi202g00019 | 264 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 32 | 204 | IPR014476 | GO:0003680 | |
Vivi202g00019 | 264 | MobiDBLite | consensus disorder prediction | 17 | 46 | - | - | |
Vivi202g00019 | 264 | PIRSF | ESCAROLA | 1 | 261 | IPR014476 | GO:0003680 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi202g00019 | 37 | 189 | AT-hook Motif Nuclear Localized (AHL) Family | AT1G76500 | 53.049 | 7.64e-44 | 149 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi202g00019 | - | - | psat:127088334 | 455.677 |