Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi201g00004 ATGGAAAATATGCCACCAGGTTATCGTTTTTACCCTACAGAAGAAGAGTTGATTTCTTTCTATCTTCATAATATGCTTGAAGGAAAGAAACAATGCATCATAAGAACTGTTATACCGGTTGTTAACATATACGACTATAATCCGTCACAACTCCCACGAATTTCTGGAGAGGCTAGTATGAGAGATACGGAGCAATGGTTCTTTTTCATTCCGAGGCAAGAGAGTGAAGTGAGAGGAGGAAGACCAAAACGTCTTACAACTACGGGTTACTGGAAGGCTACTGGTTCTCCTAATCATGTTTATTCTTCGGATAATCGCGTGATCGGTATGAAAAGGACTATGGTTTTTTATTGTGGAAGAGCTCCAAATGGAAGGAAGACCGATTGGAAAATGAACGAGTATAAGGCCATTCAAGATGAATCAGGTCCTAAGTTAAGGCAAGAATTTAGTTTAAGTCGAGTGTACAAGAAATCAAAGTGTTTGAGGGCATTTGATAGACGGCCACTACCAAGGAGGGTTACACCATGTGTTCAAAAAGCTCAAGAGCAGATGAATTCAACATGCGATCATGATGTTCAGGTATTGATGGAGATAAGTCCAACAAGCTCACCAGAATGCTCTTCTTCTATAGATCATGGCCAACCCTCACATGAGGTTGGAGAAGGTAGCCAAATGGATGTTAATGTTGACTGTGAGCCTTTGTTGGATTGGGAACAAGTGGATTGGTTCTTGGGATCAGAGCCTTGA 747 0.411 MENMPPGYRFYPTEEELISFYLHNMLEGKKQCIIRTVIPVVNIYDYNPSQLPRISGEASMRDTEQWFFFIPRQESEVRGGRPKRLTTTGYWKATGSPNHVYSSDNRVIGMKRTMVFYCGRAPNGRKTDWKMNEYKAIQDESGPKLRQEFSLSRVYKKSKCLRAFDRRPLPRRVTPCVQKAQEQMNSTCDHDVQVLMEISPTSSPECSSSIDHGQPSHEVGEGSQMDVNVDCEPLLDWEQVDWFLGSEP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi201g00004 248 Gene3D NAC domain 13 161 IPR036093 GO:0003677|GO:0006355
Vivi201g00004 248 Pfam No apical meristem (NAM) protein 5 135 IPR003441 GO:0003677|GO:0006355
Vivi201g00004 248 SUPERFAMILY NAC domain 2 157 IPR036093 GO:0003677|GO:0006355
Vivi201g00004 248 ProSiteProfiles NAC domain profile. 4 157 IPR003441 GO:0003677|GO:0006355
Vivi201g00004 248 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 193 - -
Vivi201g00004 248 MobiDBLite consensus disorder prediction 201 222 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi201g00004 7 242 NAC Transcription Factor Family AT5G22380 47.773 2.50e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi201g00004 NAM 1.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi201g00004 - - psat:127125619 469.544