Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi200g00008 ATGCCGCCGCGTCGCTGCACGGTTTACGCCGATAGCGATTACGACGACGATGACGATGATAACCTCACGTCGAGGATTATACGGTGTCTCTCTTGCGACGAGAATTACGAGCCCGACGATGCCGGTACCTGCAAAGAATGCTACGAAGAAGCGAACGAAACCGAGGAGGAACTCAAACGTCAGATCCAAGACCTCAAATCCAAAGTCTCGTTCCTTACTCTCTCTTCGCCGCTTGATTCTCCTTCCACGACTGATCTCGTTCTTCTTCCGTCTGGTGATGCTTTCTCTCCTTCCATTCCTGCTCACAAGGCCGTTCTCGTTAGTCGCTCTCCAGTCTTCAGAGCCATGCTTGAACACGATATGGATGAAAGTCGGAGTGGCACCATCAAGATTGCTGACGTATCATACGACGCCCTTCGTGCTTTCGTTAACTACTTATACACTGCTGAAGCATTCCTTGACAACCAAATGGCATGTAACCTTTTAGTTTTAGCCGAAAAATATCAGGTGAAGCATCTTAAAGCATACTGTGAGAAATATTTGATCTCCAAACTGAATTGGGAGAAAGCTGTTGTAAACTTTGCCTTTGCTCATCAACACAATGCCAACCAATTGCAAGATGCAGCCTTGGCAGTGATCATGGAGAACATGGACAACCTCACTAAAAATGAAGATTATATAGAATTAGTGGAGAGTAATCCACGTCTTGTTGTGGAAATATACGAAGCATATCTTGGCAAACAGGTTAATACTGCAGCCACACACGCGCTATAG 774 0.4599 MPPRRCTVYADSDYDDDDDDNLTSRIIRCLSCDENYEPDDAGTCKECYEEANETEEELKRQIQDLKSKVSFLTLSSPLDSPSTTDLVLLPSGDAFSPSIPAHKAVLVSRSPVFRAMLEHDMDESRSGTIKIADVSYDALRAFVNYLYTAEAFLDNQMACNLLVLAEKYQVKHLKAYCEKYLISKLNWEKAVVNFAFAHQHNANQLQDAALAVIMENMDNLTKNEDYIELVESNPRLVVEIYEAYLGKQVNTAATHAL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi200g00008 257 FunFam BTB/POZ domain-containing protein 187 256 - -
Vivi200g00008 257 ProSiteProfiles BTB domain profile. 84 155 IPR000210 GO:0005515
Vivi200g00008 257 SMART BTB_4 84 185 IPR000210 GO:0005515
Vivi200g00008 257 Gene3D - 187 255 - -
Vivi200g00008 257 Gene3D Potassium Channel Kv1.1; Chain A 51 186 IPR011333 -
Vivi200g00008 257 PANTHER SPECKLE-TYPE POZ PROTEIN 43 250 - -
Vivi200g00008 257 Pfam BTB/POZ domain 78 184 IPR000210 GO:0005515
Vivi200g00008 257 SUPERFAMILY POZ domain 75 183 IPR011333 -
Vivi200g00008 257 Coils Coil 44 75 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vivi200g00008 BTB 8.9e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi200g00008 K10523 - gmx:100794118 317.39