Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi200g00007 ATGACGATGATAACCTCACGTCGAGGATTATACGGTGTCTCTCTTGCGACGAGAATTACGAGCCCGACGATGCCGGTACCTGCAAAGAATGCTACGAAGAAGCGAACGAAACCGAGGAGGAACTCAAACGTCAGATCCAAGACCTCAAATCCAAAGTCTCGTTCCTTACTCTCTCTTCGCCGCTTGATTCTCCTTCCACGACTGATCTCGTTCTTCTTCCGTCTGGTTAGTCGCTCTCCAGTCTTCAGAGCCATGCTTGAACACGATATGGATGAAAGTCGGAGTGGCACCATCAAGATTGCTGACGTATCATACGACGCCCTTCGTGCTTTCGTTAACTACTTATACACTGCTGAAGCATTCCTTGACAACCAAATGGCATGTAACCTTTTAGTTTTAGCCGAAAAATATCAGGTGAAGCATCTTAAAGCATACTGTGAGAAATATTTGATCTCCAAACTGAATTGGGAGAAAGCTGTTGTAAACTTTGCCTTTGCTCATCAACACAATGCCAACCAATTGCAAGATGCAGCCTTGGCAGTGATCATGGAGAACATGGACAACCTCACTAAAAATGAAGATTATATAGAATTAGTGGAGAGTAATCCACGTCTTGTTGTGGAAATATACGAAGCATATCTTGGCAAACAGGTTAATACTGCAGCCACACACGCGCTATAG 681 0.4435 MTMITSRRGLYGVSLATRITSPTMPVPAKNATKKRTKPRRNSNVRSKTSNPKSRSLLSLRRLILLPRLISFFFRLVSRSPVFRAMLEHDMDESRSGTIKIADVSYDALRAFVNYLYTAEAFLDNQMACNLLVLAEKYQVKHLKAYCEKYLISKLNWEKAVVNFAFAHQHNANQLQDAALAVIMENMDNLTKNEDYIELVESNPRLVVEIYEAYLGKQVNTAATHAL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi200g00007 226 SMART BTB_4 60 154 IPR000210 GO:0005515
Vivi200g00007 226 SUPERFAMILY POZ domain 74 152 IPR011333 -
Vivi200g00007 226 Gene3D - 156 224 - -
Vivi200g00007 226 Gene3D Potassium Channel Kv1.1; Chain A 73 155 IPR011333 -
Vivi200g00007 226 ProSiteProfiles BTB domain profile. 75 124 IPR000210 GO:0005515
Vivi200g00007 226 FunFam BTB/POZ domain-containing protein 156 225 - -
Vivi200g00007 226 MobiDBLite consensus disorder prediction 22 52 - -
Vivi200g00007 226 Pfam BTB/POZ domain 75 153 IPR000210 GO:0005515
Vivi200g00007 226 PANTHER SPECKLE-TYPE POZ PROTEIN 75 219 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vivi200g00007 BTB 5.6e-17 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi200g00007 K10523 - csin:114267050 241.891