Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08840 ATGGAGAAAATGGAGGATGAATCTCCCAGGAATAAAGTCAAATTCCTCTGCAGTTATGGCGGGAAGGTTCTTCCCCGACCCTCTGATGGAGTCCTTAAGTATGTAGGCGGCGAGACTCGCGTCATTTGTATTCCTCGCGATGTAACTTTCGCAGATATGATGAAGAAGGTGAGTGGCGTGGTTGATGGCGAGGTGGTGTTGAAGTACCAGGTGATTCCTGAAGAACTTGATACATTGGTGACTGTTAGAACAGAAGATGATCTGAAGCACATGATTACGGAACTTGATCGGCACGAGAGTGGTGGATCGCCATTGCTTCGCGCGTTTCTATTTCCATTGAAGCCGTTGATAGTTGACAACCAGAGTCAAATGCAAATGCAACAAGTAGTCTCGCATCCACCTCCTGTTGAACCATATTTTTTAGAACAGCGTTACCTTGATGCCATCAATGGAATCGTACGCCAAAGCCCCGGCTCCAAATATGCGGCTTTCTCTGCGTGTTCTTCACCAAAATCAACCTCCCCGGAAGGATGTACACCCGGGGAATCGCCCTTCCATCATCAAGGTATGCCGCAGTTACCGAAGGGTATGGTTTCGATGCAAAGAGTGAGAAGCTCTCCGAGTTTATCCAGCCTTACAAGCACCTACAATAATACGCAACCGTTACAGCAGCCGCCGCAACCGCATAATCATGGTATTAGTAGAAGTAGGAGTAGTCATTATCAACACCAGCACCACCCTCTTGTTGGACTTAAACCAATACAAGAAGTAGGGATGGGAATGGGGATGGGAAGAGTATCTCCATCTCAGATGAGTATGAATATGATGACAGATAATATGAGTAGTAGCAGTAGTAGCAGTAGGGGTATGAATTACTATTACACCAATGCAAACAGACCCCATAAAGCTTATCCATACCATGATGATTCAGTTGGTCATGTTGTGGTTGAAAGAGTTCAATCAGTCCCCAGGAGTCCCAGACCGTACTTAGGTGAATGA 999 0.4615 MEKMEDESPRNKVKFLCSYGGKVLPRPSDGVLKYVGGETRVICIPRDVTFADMMKKVSGVVDGEVVLKYQVIPEELDTLVTVRTEDDLKHMITELDRHESGGSPLLRAFLFPLKPLIVDNQSQMQMQQVVSHPPPVEPYFLEQRYLDAINGIVRQSPGSKYAAFSACSSPKSTSPEGCTPGESPFHHQGMPQLPKGMVSMQRVRSSPSLSSLTSTYNNTQPLQQPPQPHNHGISRSRSSHYQHQHHPLVGLKPIQEVGMGMGMGRVSPSQMSMNMMTDNMSSSSSSSRGMNYYYTNANRPHKAYPYHDDSVGHVVVERVQSVPRSPRPYLGE 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08840 332 MobiDBLite consensus disorder prediction 208 245 - -
Vivi1g08840 332 Gene3D - 33 111 - -
Vivi1g08840 332 SMART PB1_new 27 113 IPR000270 GO:0005515
Vivi1g08840 332 SUPERFAMILY CAD & PB1 domains 28 116 - -
Vivi1g08840 332 Pfam PB1 domain 32 112 IPR000270 GO:0005515
Vivi1g08840 332 MobiDBLite consensus disorder prediction 208 235 - -
Vivi1g08840 332 CDD PB1_UP2 16 111 - -
Vivi1g08840 332 PANTHER OS05G0427100 PROTEIN-RELATED 6 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08840 Vivi-Chr1 252159443 252161188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08840 6 172 MAP Kinase Kinase Kinase AT3G46920 38.824 2.92e-29 116