Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08827 ATGGCTCTGATCCTGCACGCCGCCTCGGCCAGCAAAAATGTTTTCAAGACTCTGATTGCTGCTGAGTATGTCGGTGTTAAAGTTGAATTGGCACCAGGTTTTCAGATGGGTGTCTCTAATAAAACCCCTGAATTTCTCAAGTTGAACCCTATTGGAAAGGTTCCGGTCTTGGAAACCCCCGAAGGTGCCGTCTTCGAGAGCAATGCAATTGCTCGTTATGTTGCTCGATTGGGTGAAAACAATTTGTTTGGATCTTCTCCCATTGATCAGGCTCATGTTGACCAGTGGATTGATTTTTCTTCGTTGGAGATTGATGCCAATCTTTCAAAGTTGTTCATTCCTAGACTTGGAAAAGCCCCATACATTCCTCTTGTGGAGGAGTCTGCATTTTCATCATTGAAGAGAGCATTTGAGGCTCTTAACACTCACCTTGCCCACAATACCTACCTGGTTGGGGATTCTGTTACCCTTGCTGATATTATAACAACATCCAACTTGTGGCTTGGTTTCTCCAAACTCTTGGTCAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAACCAGCCTAACTTCCGAAAGATAATAGGCCAGGTTAAGCAGACTGAAGCTTTGCCACCTATTCCATCTGCTCAGAAGCCTAAGGAATCTAAGCCCAAAACTAAAGATGAACCCAAGAAAGTGGCTAAATCAGAGCCCGCAAAGCCCAAAGTAGAAGAAGCTGAAGAGGAGGCACCCAAGCCCAAAGCCAAGAATCCTCTTGATCTTCTTCCTCCAAGCAAGATGATATTGGATGAGTGGAAAAGACTTTACTCTAACACGAAGAGCAACTTCCGTGAGGTCGCAATCAAAGGATTCTGGGACATGTATGATCCAGAAGGATATTCTCTCTGGTTCTGTGATTACAAATACCAAGATGAGAACACTGTTTCCTTCGTGACACTGAACAAGGTTGGTGGATTTCTTCAGAGGATGGATCTGGCTCGCAAGTATGCATTTGGAAAGATGCTTGTGATTGGATCAGCGGCTCCATTTAAGGTGAAGGGATTGTGGCTTTTCCGTGGACAGGAGATTCCACAATTTGTCATTGATGAATGCTATGACATGGAGCTCTACGAGTGGACCAAGGTTGACATCTCCGACGAAGCTCAGAAAGAGCGTGTTAGTCAGATGATTGAAGATTTTGAACCATTTGAGGGAGAGGCTCTTTTGGATGCCAAGTGCTTTAAGTGA 1251 0.4468 MALILHAASASKNVFKTLIAAEYVGVKVELAPGFQMGVSNKTPEFLKLNPIGKVPVLETPEGAVFESNAIARYVARLGENNLFGSSPIDQAHVDQWIDFSSLEIDANLSKLFIPRLGKAPYIPLVEESAFSSLKRAFEALNTHLAHNTYLVGDSVTLADIITTSNLWLGFSKLLVKSFTSEFPHVERYFWTLVNQPNFRKIIGQVKQTEALPPIPSAQKPKESKPKTKDEPKKVAKSEPAKPKVEEAEEEAPKPKAKNPLDLLPPSKMILDEWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYQDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSAAPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDISDEAQKERVSQMIEDFEPFEGEALLDAKCFK 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08827 416 SUPERFAMILY GST C-terminal domain-like 73 211 IPR036282 -
Vivi1g08827 416 CDD GST_C_EF1Bgamma_like 89 209 - -
Vivi1g08827 416 CDD GST_N_EF1Bgamma 5 77 - -
Vivi1g08827 416 SUPERFAMILY Thioredoxin-like 2 77 IPR036249 -
Vivi1g08827 416 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Vivi1g08827 416 Gene3D Glutaredoxin 1 74 - -
Vivi1g08827 416 SMART EF1G_2 255 363 IPR001662 GO:0003746|GO:0006414
Vivi1g08827 416 FunFam Elongation factor 1-gamma 1 256 416 - -
Vivi1g08827 416 SFLD Glutathione Transferase (cytosolic) 4 189 IPR040079 -
Vivi1g08827 416 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Vivi1g08827 416 MobiDBLite consensus disorder prediction 211 261 - -
Vivi1g08827 416 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 256 416 IPR001662 GO:0003746|GO:0006414
Vivi1g08827 416 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Vivi1g08827 416 SFLD Main (cytGST) 4 189 - -
Vivi1g08827 416 FunFam Elongation factor 1 gamma 79 214 - -
Vivi1g08827 416 FunFam Elongation factor 1B gamma 1 74 - -
Vivi1g08827 416 Pfam Elongation factor 1 gamma, conserved domain 255 363 IPR001662 GO:0003746|GO:0006414
Vivi1g08827 416 SUPERFAMILY eEF1-gamma domain 257 416 IPR036433 GO:0003746|GO:0006414
Vivi1g08827 416 Gene3D - 79 211 - -
Vivi1g08827 416 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 416 IPR044628 GO:0004364
Vivi1g08827 416 MobiDBLite consensus disorder prediction 221 256 - -
Vivi1g08827 416 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 256 416 IPR036433 GO:0003746|GO:0006414
Vivi1g08827 416 Pfam Glutathione S-transferase, C-terminal domain 127 196 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08827 Vivi-Chr1 252056754 252059642 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08827 1 416 Eukaryotic Initiation Factors Gene Family AT1G57720 73.621 0.0 612