Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08786 ATGGAACTATCAGATTTGCAAAACAACAAACAGAAGAGAGGCACCACCACTCTTCCCCACCACCAACACCACCAACAACAAGAATCTTCACCTTCAAATTCTCATTCTCAGCAACAACAACTTGTGGTCCCTTTTGATGGAAGGCCACCACAATCTTTCATTATGGGCTCCATCTCTAATATCCAACCTTCTTCAAACTCTTCCTCTTCATCATCCAATTCTTCTTCTTCTTCCGCTTCAGCTTCTGCAACTACTCCTCATCTTATCGACGCTTCTCTCGCAATCGCCACCAGATCTGAGCCTCCGGTACTCGACTCCACCGCTGCAGCCGCCAACAATAACAACAACAACAATACTCAGAATCAGATTCAACAATTCTCTTCTTCATCCACGGCCGTCACCGTAGCAAATCCTCCCAAACGATCTACCAAGGACAGACACACTAAAGTCGATGGCCGGGGACGAAGAATTCGAATGCCGGCGACATGTGCGGCTAGAGTTTTTCAGTTGACCAGAGAATTAGGTCATAAATCCGACGGTGAAACAATTGAGTGGCTTCTCCAGCAAGCGGAGCCGGCTATTATTGCCGCCACCGGCACAGGAACAATCCCGGCTAATTTCTCAACACTCAATGTTTCACTACGAAGCAGCGGCTCCACGCTGTCGGCGCCGCCGTCGAAATCCGCTCCTCATAGTTTTCACAGCGCGCTTGGACTGGCGGCGCACCATCCGTTTGAAGAAGCTGCGTACCAACACCAACACCAACACGCGCCTCTTCTAGGGTTTCATCCTCACCAACACCAACAACATCATCTCATGAACGCGGATCAAATCGGTGAAGCTCTTTCGAATGAGAATTACATGAGAAAACGCTATAGAGAAGATCTTTTCAAAGACGATAACAACGAAAGCGGTGGCGATGGTTCTTCTTCTCCAAAAACTTTCAAAACAAATCACCAACAAGATAGTATAGGTGACGGAGAAGGTGGAGGTGGTGGTGGAGGAGGAGGTGGAGATGGAGCATCTTCATCTGCTTCTCCTGGTAATTCAATTTCTGGACTTCTTCGACCGTCGAATATGTTACCGGCAACTGCGATGTGGGCCACCGCAGGTAGTGGTAGTACAATATGGATGGTACCAGTGAGTGGTGGCGGTGGCGGAGGCGGTGGTGGTGCAAACACAAATTCAGATACACAAACGCAAAACATGTGGCCATTTAGTCCTCACACTCAATCTCAAAATCAAGCAAACGCTACTGCAACACCGTCTCAGTTACATTTCATGCCAAGGTTCAATGTTCCTCCGGGCGGCGGAAGCGGCGGGGTTGAATTCCAAGGCGGACGCGGTGGTTTACAGCTCGGTTCAGTGTATCAACCATCACAGCATCTTGGATTAGCAGTGTCTGATTCAAACTTGGGTATGTTGGCTGCTCTTAATGCTTACACAAGAGCTGGTCATTTCAATGTTAACAACAACTCTTCTTCTGATCATCATCATCAACATCAACAACATCACCATTCAATTTCATTGGACTCTCATCCTCAACAACCCAATGATGAAAGTGGAGAAGATGCTCCTAATAATTCTCAATGA 1593 0.4758 MELSDLQNNKQKRGTTTLPHHQHHQQQESSPSNSHSQQQQLVVPFDGRPPQSFIMGSISNIQPSSNSSSSSSNSSSSSASASATTPHLIDASLAIATRSEPPVLDSTAAAANNNNNNNTQNQIQQFSSSSTAVTVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHSFHSALGLAAHHPFEEAAYQHQHQHAPLLGFHPHQHQQHHLMNADQIGEALSNENYMRKRYREDLFKDDNNESGGDGSSSPKTFKTNHQQDSIGDGEGGGGGGGGGGDGASSSASPGNSISGLLRPSNMLPATAMWATAGSGSTIWMVPVSGGGGGGGGGANTNSDTQTQNMWPFSPHTQSQNQANATATPSQLHFMPRFNVPPGGGSGGVEFQGGRGGLQLGSVYQPSQHLGLAVSDSNLGMLAALNAYTRAGHFNVNNNSSSDHHHQHQQHHHSISLDSHPQQPNDESGEDAPNNSQ 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08786 530 MobiDBLite consensus disorder prediction 389 421 - -
Vivi1g08786 530 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 70 475 IPR005333 GO:0003700
Vivi1g08786 530 MobiDBLite consensus disorder prediction 303 324 - -
Vivi1g08786 530 MobiDBLite consensus disorder prediction 126 153 - -
Vivi1g08786 530 MobiDBLite consensus disorder prediction 1 83 - -
Vivi1g08786 530 MobiDBLite consensus disorder prediction 297 353 - -
Vivi1g08786 530 MobiDBLite consensus disorder prediction 53 83 - -
Vivi1g08786 530 MobiDBLite consensus disorder prediction 488 530 - -
Vivi1g08786 530 MobiDBLite consensus disorder prediction 1 45 - -
Vivi1g08786 530 ProSiteProfiles TCP domain profile. 143 197 IPR017887 -
Vivi1g08786 530 MobiDBLite consensus disorder prediction 381 421 - -
Vivi1g08786 530 Pfam TCP family transcription factor 142 294 IPR017887 -
Vivi1g08786 530 MobiDBLite consensus disorder prediction 509 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08786 Vivi-Chr1 251409384 251412145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08786 140 471 TCP Transcription Factor Family AT1G35560 44.248 9.54e-64 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi1g08786 TCP 3.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08786 - - vvo:131635606 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g08786 1 251409384 251412145 Vivi1g08786 1 251409384 251412145 ECH