Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08763 ATGGAGTATGCTGCTGGTGGGGAGCTCTTTGAGCGAATTGTCTCTGCCGGAAGATTCAGTGAAGATGAGGCTCGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGCCATTCCATGCAAATCTGCCATCGAGACTTGAAACTTGAGAACACGTTATTGGACGGTAGCCCTGCCCCGCGGCTCAAAATTTGCGATTTTGGTTATTCTAAGTCCTCTCTACTGCATTCTAGACCTAAATCAACAGTCGGAACTCCCGCTTACATAGCACCAGAAGTTCTTTCACGTAGAGAATACGACGGAAAGTTGGCAGATGTATGGTCATGTGGAGTGACTCTTTATGTAATGCTGGTGGGAGCATACCCATTTGAGGACCAAGATGATCCCAAAAATTTCAGGAAAACCATTAATAAAATTATGGCTATTCAATACAAGATTCCGGATTATGTTCACATATCTGAAGATTGTAAACATCTGCTGTCTCACATTTTCGTGGCAAGTCCAGCTAGGAGAATCAGCATTAAGGAAATCAAGTCTCATCCGTGGTTTTTGAAGAACTTGCCTCGAGAATTGACCGAAATGGCTCAAGCTGTTTACTACAAAAAAGAAAATCCAACTTATTCTCTTCAAAGCATTGAAGACATTATGAGTATTGTTGAAGAAGCTAAATCTCCGCCTCAAGTGTCTAGGTCGATTGGAGGGTTTGGCTGGGGAGGAGTAGAAGACGACGATGATGAAACAAAAGAAGCTGAGGCTGAGGTGGAAGAAGATGAATATGAAAAGAGAGTCAAGGAAGCACAAGAAAGTGGAGAATTCAATTTAAACTAA 831 0.4236 MEYAAGGELFERIVSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTINKIMAIQYKIPDYVHISEDCKHLLSHIFVASPARRISIKEIKSHPWFLKNLPRELTEMAQAVYYKKENPTYSLQSIEDIMSIVEEAKSPPQVSRSIGGFGWGGVEDDDDETKEAEAEVEEDEYEKRVKEAQESGEFNLN 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08763 276 Coils Coil 250 270 - -
Vivi1g08763 276 MobiDBLite consensus disorder prediction 240 255 - -
Vivi1g08763 276 FunFam Serine/threonine-protein kinase SRK2A 4 192 - -
Vivi1g08763 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Vivi1g08763 276 SMART serkin_6 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g08763 276 MobiDBLite consensus disorder prediction 228 276 - -
Vivi1g08763 276 Gene3D Transferase(Phosphotransferase) domain 1 1 231 - -
Vivi1g08763 276 PANTHER SERINE/THREONINE KINASE 1 222 - -
Vivi1g08763 276 Pfam Protein kinase domain 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g08763 276 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g08763 276 SUPERFAMILY Protein kinase-like (PK-like) 1 227 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08763 Vivi-Chr1 250778368 250780911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08763 1 187 CBL-interacting serine-threonine protein kinases AT4G24400 46.875 3.52e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vivi1g08763 Pkinase 6.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08763 K14498 - gmx:100812259 494.197