Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08751 ATGGAGAACAATTTCAGTTCATATAATTCTTCTAGCTTGAACAGAAAACATCATCATCATCATCACACATCATCTTCATCATTCAATCTAAGGAATGTTTCAAAACTCATTCTTCCACCACTTGGTGCTCCTAAAGAGAATCAAGTTTACTCTAAATGGATCATTTCACCAATGGATTCTAGATACAGGTGTTGGGAGAGTTTTATGGTTGTTTTGGTAGCATATTCTGCATGGGTTTATCCCTTTGAAGTTGCTTTCATGCATTCTTCTCCAAATAGAAAACTCTATATTGTGGACAATATTGTTGATTTTTTCTTCGCCATTGATATTGTGATGACATTCTTTGTGGCATTCATTGATGGAACTACTCATCTACTGGTCAGAGATTCCAAGAAAATTGTTGTCAGGTACTTGTCAACATGGTTCATAATGGATGTGGCATCAACAATACCCTATGAAGCAATAGGCTTCATTTTAACTGGCAAACACAAACTAGGCCTCCCTTACTTCCTCTTGGGAATGCTCAGATTTTGGAGAATCAGACGTGTCAAACAATTCTTCACAAGGCTTGAAAAAGACATCAGATTCAGCTATTTTTGGGTCAGATGTGCTAGGCTTCTTTCTGTCACACTTTTCTCAATTCACTGTGCTGGATGTCTCTATTACATGCTAGCTGATAGGTATCCTCATCAAGGCAATACATGGATTGGAGCTGTCATTCCAAATTTCAGAGAGACTAGTCCTAGAACAAGATACATTTCAGCCATATACTGGTCCATCACGACGATGACTACCGTTGGTTACGGCGATCTTCACGCTGTCAACACCATGGAAATGATTTTCATTATTTTTTATATGCTCTTCAATCTTGGACTAACCGCTTACTTAATCGGTAACATGACGAATCTTGTAGTTGAAGGAACTCGCCGCACAATGGAATTCAGAAATAGCATTGAAGCAGCATCGAACTTTGTGTGCCGAAATAGGCTGCCTCCGAGGCTAAAAGAACAAATCCTTGCTTACATGTGTTTGAGATTTAAGGCGGAGAGATTGAATCAACATCAGCTAATCGAACAGCTTCCGAAATCAATTTGCAAAAGCATTTGCCAGCATTTGTTTTTTCCAACTGTGGAGAAAGTCTATCTCTTCCAAGGCGTCTCGAAAGAGATCCTTTTGTCCCTAGTTGCGAAAATGAATGCGGAATACATACCGCCGAAAGAGGATGTTATAATGCAAAATGAAGCGCCGGACGATGTTTACATCATAGTGTCGGGAGAAGTAGAGATCATTGATAGTGTGATAGAGAAAGAGAGAGTTTTAGGGACTCTAATAGCAGGAGACATGTTTGGAGAAGTTGGTGCACTTTGTTGTAGGTCTCAAAGCTATACATATAGAACCAAGACTCTTACACAGCTTCTGAGGTTGAAAACCAATGCTCTTATAGAAGCAATGCAGATCAAAAAAGAAGATAATATTCTAATACTAAAAAATTTCCTTCAGCATTATAAGCAGCTTAAGGATTTGAGTATCAAAGATTTAATGGTGGAGAATGTGGAAGAAGAGGATCCTAACATGGCTGTGAATTTGTTAACTGTGGCTGGCACAGGTAATGCTGCTTTTCTTGAGGAGCTTCTAAGAGCTGGTTTGGATCCTGATATTGGTGACTCAAAAGGAAAAACTCCATTGCATATAGCAGCATCAAATGGACATGAAGAGTGTGTGAAAGTTTTGCTCAAACATACATGCAACATTCATATAAAAGATATGAATGGTAACACTGCACTATGGTATGCAATAGCCTCAAAGCATTACTCAATCTTCAGAATCCTCTATCAGCTATCTGCACTCTCCGATCCATACACGGCAGGGAATCTTCTATGTCTAGCAGCGAAAAGAAACGATATAACTGTGATGAACGAGCTTCTAAAGCAAGGACTAAACATTGACTCGAAAGATGGACACGGAACAACGGCTATCCAAATCGCCATGACAGAAAATCTAGTTGACATGGTTCAGTTACTTGTCCTGAACGGCGCAGATGTTGCTAATATACATGTTCATGAATTTTCTGCGGTCACCTTAAATGAAATGCTGCAGAAACGGGAAATTGGGCATTTAATTAATGTGAATGAGACAATGCCTAGTGAATTTGTATTAAAAGATGAAAATGAAGAAGATCAGAAACAAACTTGGAGAAGATATAATGGAGTAGAGTTTCCGAGAGTAAGTATATATAGAGGTCACCCAATAGTGAGAAGAGAAAAAGGTTTCATTGAAGCCGGAAAGTTAATAAGGTTGCCTGATTCATTAGAAAAGCTCAAAATTATCGCAGGTGAAAAGTTTGAGTTTGATGCAAGAGATGCAATGGTGACAAATGAAGAAGGAGCAGAAATAGATAGTATTGATGTGATAAGAGATAATGATAAGCTTTTTATCGTTGATTAG 2445 0.3849 MENNFSSYNSSSLNRKHHHHHHTSSSSFNLRNVSKLILPPLGAPKENQVYSKWIISPMDSRYRCWESFMVVLVAYSAWVYPFEVAFMHSSPNRKLYIVDNIVDFFFAIDIVMTFFVAFIDGTTHLLVRDSKKIVVRYLSTWFIMDVASTIPYEAIGFILTGKHKLGLPYFLLGMLRFWRIRRVKQFFTRLEKDIRFSYFWVRCARLLSVTLFSIHCAGCLYYMLADRYPHQGNTWIGAVIPNFRETSPRTRYISAIYWSITTMTTVGYGDLHAVNTMEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNRLPPRLKEQILAYMCLRFKAERLNQHQLIEQLPKSICKSICQHLFFPTVEKVYLFQGVSKEILLSLVAKMNAEYIPPKEDVIMQNEAPDDVYIIVSGEVEIIDSVIEKERVLGTLIAGDMFGEVGALCCRSQSYTYRTKTLTQLLRLKTNALIEAMQIKKEDNILILKNFLQHYKQLKDLSIKDLMVENVEEEDPNMAVNLLTVAGTGNAAFLEELLRAGLDPDIGDSKGKTPLHIAASNGHEECVKVLLKHTCNIHIKDMNGNTALWYAIASKHYSIFRILYQLSALSDPYTAGNLLCLAAKRNDITVMNELLKQGLNIDSKDGHGTTAIQIAMTENLVDMVQLLVLNGADVANIHVHEFSAVTLNEMLQKREIGHLINVNETMPSEFVLKDENEEDQKQTWRRYNGVEFPRVSIYRGHPIVRREKGFIEAGKLIRLPDSLEKLKIIAGEKFEFDARDAMVTNEEGAEIDSIDVIRDNDKLFIVD 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08751 814 ProSiteProfiles cAMP/cGMP binding motif profile. 382 501 IPR000595 -
Vivi1g08751 814 SUPERFAMILY Ankyrin repeat 518 693 IPR036770 -
Vivi1g08751 814 SUPERFAMILY cAMP-binding domain-like 309 500 IPR018490 -
Vivi1g08751 814 ProSiteProfiles Ankyrin repeat region circular profile. 654 681 - -
Vivi1g08751 814 ProSiteProfiles Ankyrin repeat profile. 557 589 IPR002110 GO:0005515
Vivi1g08751 814 FunFam Potassium channel KAT3 64 306 - -
Vivi1g08751 814 Gene3D - 63 305 - -
Vivi1g08751 814 ProSiteProfiles KHA domain profile. 741 814 IPR021789 -
Vivi1g08751 814 SUPERFAMILY Voltage-gated potassium channels 57 305 - -
Vivi1g08751 814 Pfam Ankyrin repeats (3 copies) 535 611 IPR002110 GO:0005515
Vivi1g08751 814 CDD CAP_ED 382 485 IPR000595 -
Vivi1g08751 814 PRINTS EAG/ELK/ERG potassium channel family signature 99 109 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi1g08751 814 PRINTS EAG/ELK/ERG potassium channel family signature 278 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi1g08751 814 PRINTS EAG/ELK/ERG potassium channel family signature 110 119 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi1g08751 814 PRINTS EAG/ELK/ERG potassium channel family signature 296 305 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi1g08751 814 PRINTS EAG/ELK/ERG potassium channel family signature 252 269 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi1g08751 814 PANTHER POTASSIUM CHANNEL AKT1 28 813 IPR045319 GO:0005249|GO:0006813
Vivi1g08751 814 PRINTS Ankyrin repeat signature 558 573 IPR002110 GO:0005515
Vivi1g08751 814 PRINTS Ankyrin repeat signature 670 684 IPR002110 GO:0005515
Vivi1g08751 814 MobiDBLite consensus disorder prediction 1 27 - -
Vivi1g08751 814 Gene3D Jelly Rolls 350 524 IPR014710 -
Vivi1g08751 814 Pfam KHA, dimerisation domain of potassium ion channel 740 812 IPR021789 -
Vivi1g08751 814 ProSiteProfiles Ankyrin repeat profile. 654 686 IPR002110 GO:0005515
Vivi1g08751 814 ProSiteProfiles Ankyrin repeat region circular profile. 557 588 - -
Vivi1g08751 814 SMART ANK_2a 654 683 IPR002110 GO:0005515
Vivi1g08751 814 SMART ANK_2a 557 586 IPR002110 GO:0005515
Vivi1g08751 814 SMART ANK_2a 621 650 IPR002110 GO:0005515
Vivi1g08751 814 SMART ANK_2a 524 553 IPR002110 GO:0005515
Vivi1g08751 814 SMART ANK_2a 590 620 IPR002110 GO:0005515
Vivi1g08751 814 SMART cnmp_10 382 499 IPR000595 -
Vivi1g08751 814 Pfam Ion transport protein 63 311 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vivi1g08751 814 Pfam Cyclic nucleotide-binding domain 402 485 IPR000595 -
Vivi1g08751 814 Gene3D - 526 708 IPR036770 -
Vivi1g08751 814 FunFam Potassium channel KAT2 370 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08751 Vivi-Chr1 250635899 250642018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08751 10 562 Ion Channels AT4G22200 72.310 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08751 K21867 - gmx:100798422 1338.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g08751 1 250635899 250642018 Vivi1g08751 1 250635899 250642018 ECH